Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02033 ATGGCAGGAATGCTTCCTGGAGTTGAATGTGCTAGAAGAAGAGGGTTCCGTAAGAGTGTAGGGGGCTTAGATTCACCATCTTTGGCTTCACATAACTCCACAAGGCGCTCTTCTTTTTGTTTATATGCAAGTAACCATGAATCTCGTCTTTCCTCATCCTTTTCACTGCAGCAAAGAGGCATGTTATCCCAGGCACACCCAGATGAGAGTATGGTAGAAGCAGCCAGAGAAGCCAAACAGAGATTAGATGGCAAGTTCAGAGGACAAAGGGCATCAGAAAACAAAAGACAAAACAGCATAAAGGGTGTGGAGGGGGGCGGAAGAACAAGCTCAGAAGAGTTGCACACTGAGATATATGGGTCAAAGAGAAGTGGTTCTTGGAGATTCAGTTGGAGTAAATTGAGTTGGAAGGCCTCAGAACAAGAGGATTGTGCTGTGTGCTTGGAATCATTCAGGATTGGAGAGACACTGATCCCTCTCCCTTGTGCCCACAGGTTCCATTTCAGATGCTTGAAACCATGGTTAGAAAATAATTCTCACTGCCCTTGCTGCAGAACCACCATTGATTATTCCCTCTAG 579 0.456 MAGMLPGVECARRRGFRKSVGGLDSPSLASHNSTRRSSFCLYASNHESRLSSSFSLQQRGMLSQAHPDESMVEAAREAKQRLDGKFRGQRASENKRQNSIKGVEGGGRTSSEELHTEIYGSKRSGSWRFSWSKLSWKASEQEDCAVCLESFRIGETLIPLPCAHRFHFRCLKPWLENNSHCPCCRTTIDYSL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02033 192 ProSiteProfiles Zinc finger RING-type profile. 144 185 IPR001841 -
Rops11g02033 192 MobiDBLite consensus disorder prediction 77 114 - -
Rops11g02033 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 190 IPR013083 -
Rops11g02033 192 SMART ring_2 144 184 IPR001841 -
Rops11g02033 192 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 51 186 - -
Rops11g02033 192 FunFam Zinc finger family protein 118 190 - -
Rops11g02033 192 SUPERFAMILY RING/U-box 132 190 - -
Rops11g02033 192 MobiDBLite consensus disorder prediction 77 94 - -
Rops11g02033 192 Pfam Ring finger domain 143 185 IPR001841 -
Rops11g02033 192 CDD RING-H2_PA-TM-RING 143 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02033 Rops-Chr11 33161667 33162764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02033 1 87 C3H Transcription Factor Family AT2G15580 44.792 9.03e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02033 - - gmx:100527583 267.7