Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g02029 | ATGGCCGAACAAACTGAGAAGGCTTTTCTGAAGCAACCCAAAGTGTTTTTAAGTTCAAAGAATTCTGGGAAGGGAAAGAGGCCCGGAAAAGGTGGCAACCGCTTTTCGAAATCGATTGGGCTTGGATTCAAGACTCCCAGGGATGCCATTGAAGGAACCTATATTGACAAGAAGTGCCCTTTCACTGGCACTGTCTCCATCCGGGGTCGTATCCTAGCTGGTACTTGTCATAGTGCTAAGATGACAAGGACTATTATTGTTAGGAGGAATTATCTTCACTTTGTTAAAAAGTATCAGAGATATGAGAAGCGGCATTCAAATATTCCTGCACATGTATCACCTTGTTTCCGTGTGAAGGAAGGAGATCATGTTATTATTGGCCAATGCAGGCCACTCTCAAAGACAGTGAGATTCAATGTGTTGAAAGTGATCCCAGCCGGATCTTCTAGTGGTGCAAAGAAGGCATTTACTGGAATGTGA | 480 | 0.4375 | MAEQTEKAFLKQPKVFLSSKNSGKGKRPGKGGNRFSKSIGLGFKTPRDAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM* | 160 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g02029 | 159 | PANTHER | 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER | 10 | 150 | IPR000266 | GO:0003735|GO:0005840|GO:0006412 | |
Rops11g02029 | 159 | NCBIfam | 30S ribosomal protein S17 | 55 | 143 | IPR028333 | - | |
Rops11g02029 | 159 | ProSitePatterns | Ribosomal protein S17 signature. | 121 | 133 | IPR019979 | GO:0003735|GO:0005840|GO:0006412 | |
Rops11g02029 | 159 | Pfam | Ribosomal protein S17 | 74 | 142 | IPR000266 | GO:0003735|GO:0005840|GO:0006412 | |
Rops11g02029 | 159 | PRINTS | Ribosomal protein S17 family signature | 131 | 138 | IPR000266 | GO:0003735|GO:0005840|GO:0006412 | |
Rops11g02029 | 159 | PRINTS | Ribosomal protein S17 family signature | 88 | 111 | IPR000266 | GO:0003735|GO:0005840|GO:0006412 | |
Rops11g02029 | 159 | PRINTS | Ribosomal protein S17 family signature | 121 | 131 | IPR000266 | GO:0003735|GO:0005840|GO:0006412 | |
Rops11g02029 | 159 | Pfam | Ribosomal_S17 N-terminal | 4 | 72 | IPR032440 | - | |
Rops11g02029 | 159 | MobiDBLite | consensus disorder prediction | 18 | 38 | - | - | |
Rops11g02029 | 159 | FunFam | 40S ribosomal protein S11 | 1 | 158 | - | - | |
Rops11g02029 | 159 | SUPERFAMILY | Nucleic acid-binding proteins | 68 | 147 | IPR012340 | - | |
Rops11g02029 | 159 | Gene3D | - | 1 | 158 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g02029 | Rops-Chr11 | 33117866 | 33120019 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g02029 | 1 | 159 | Cytoplasmic Ribosomal Protein Gene Family | AT5G23740 | 91.824 | 4.71e-98 | 278 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g02029 | K02949 | - | gmx:100500094 | 302.367 |