Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02023 ATGATCATGGAATGCCAAAAACCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGTTCTTACCATGAGAATGCAAAAAAGAATGAGAAGAACATATGTTGCTTAGATTGTTGCACTAGTATTTGCCCTCACTGTTTGCCATACCATCGCTTCCATAGGCTTCTTCAGGTTCGGCGTTATGTTTATCATGACGTTGTGAGATTGGAAGATCTTCAGAAACTCGTAGACTGCTCTAACGTGCAGGCCTATACCATCAACAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTAAAACTCGCCAATTCAAGGGATCAGGAAACTACTGTGCTTCCTGTGATAGAAGTCTCCAAGAGCCTTTCATCCATTGCTCCCTAGGATGCAAGGTAGATTTTGTGCTGAAACACTACAAGGACCTCACTCCCTATTTGAGAACATGCAACTCCTTGCAGCTAAGTCCTGACTTCCTAATCCCACAAGAGATGGGGGATGATGAGATAACTCATTCAACCATTTTGGAGTGTGATGATGGAATGAGCTCATCATCAGGGTCAGAGAACATGAGCATGGTTTGCACAAGGATTATTAGGAAGAAGCGAAGTGGGTGGAATGTGTGTGCAAGATTAATGGCCAACAAGGTTTCAGATGAAGACATGGCTACCAGCATGAGTAGAAGGAAAGGCATTCCTCATAGATCTCCTCTCTGTTAG 720 0.4375 MIMECQKPAWLEALYTQKFFVGCSYHENAKKNEKNICCLDCCTSICPHCLPYHRFHRLLQVRRYVYHDVVRLEDLQKLVDCSNVQAYTINSAKVVFIKKRPKTRQFKGSGNYCASCDRSLQEPFIHCSLGCKVDFVLKHYKDLTPYLRTCNSLQLSPDFLIPQEMGDDEITHSTILECDDGMSSSSGSENMSMVCTRIIRKKRSGWNVCARLMANKVSDEDMATSMSRRKGIPHRSPLC* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02023 239 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 238 - -
Rops11g02023 239 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02023 Rops-Chr11 32990474 32992588 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops11g02023 PLATZ 7.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02023 - - aprc:113852363 446.432