Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02021 ATGTTGACTCTAAAAGGAGGAACCAGGCCACCATGGGTAGGGTTAGGAGCTGCGGTGTGGGTTCAGATTGCTTCAGGGAACACTTTCACTTTCCCTCTTTACTCTCACTCTTTGAAATCGGTTCTGGGTTTTAACCAGCGTCAGGTTACACTGCTTGGTGTTGCCAATGATATTGGTGAGAACGTTGGGTTGGTTCCTGGTCTTGCTTGTAATAAGTTCCCACCGTGGCTAATACTTTGCGTTGGTTCTCTTGCCTCTTTTCTTGGCTACGGTCTTTTCTGGCTCGCTATTAGTGAAACAATTAAATCCCTTCCTTACTTGTTGCTATGGTTTGCTCTCCTTATTGCTTCCAACAGTAGTGCATGGTTAACCACTGCTGTTCTTGTGACCAACATGAGAAATTTCCCTGTTAGTAGAGGCAAAGTTGCAGGAATCCTGAAAGGTTATGGGGGGCTTAGCGGAGCAGTTTTTACTGAAATTTACAGCATAGTGCTTCGTAATAATTCTTCTAATTTCATGTTGTTTCTTGCCATTGGTATTCCTGTTATTTGCTTCAGTATGATGTTTCTTGTTAGGCCTTGTACCCCTGCTTCTGATGAAGACCCTGCAGCAAATTGGCATTTTCTATTTATCCAAGGTTCTAGTGTGGTCTTGGGTGTATATCTTCTTGTAACTACAATATTTGGTAATGCTCTTCCATTGAGTGATACAGTTTCCTATATTTTGGTGGCTGTGATGATTCTTATTCTCATGGCTCCACTTGCTATCCCTATAAAGATGACACTGTATCCTAGGACAACTTCCAATTCAGACTCACCCGAGGAACGACTTGGATCTTCTGACTCTACCATTCAAGGCAGAGATGACAAAGATGACAAGATAGAGCCGCTGCTAGCATCTTCATCAGCAGGAACCCTTGGAAGTTTTTACGATGAGGATGATTCATCTGAGGTAGCTATGCTTCTTGCTTTAGGTGAGGGCGCAGTAAAACAAAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCAGTAGTTAAAGCTGATTTCTGGTTACTATTTTTTGTTTATTTTGTTGGTGTTGGCACTGGGGTTACCGTTCTCAATAATCTAGCCCAAATAGGTATTGCACAAGGTGAGGAAGATACCACAGTCCTACTGTCAATTTTCAGTTTTTGCAATTTTGTGGGTCGGCTTGGTGGAGGAATTGTTTCAGAATATTTTGTCAGGACAAAAACGATCCCAAGGACAGCCTGGATGACATGCACACAGATAATTATGCTCATTGTATACATTCTGTTGGCCTATGCTATCAATGGTATCCTTTATCCTGCAGTTGCATTCCTTGGTGTCTGCTATGGTACACAAGTTTCCATAATGATCCCCACTATTTCTGAGCTTTTCGGTTTGAAGCACTTTGGCGTATTGAGCAACTTCGTGGCGGTTGGCAACCCACTTGGTGCATTCCTTTTCTCAGCTTTGCTAGCAGGTTATATATATGATAATGAGGCAGCAAAGCAGCATGGTATTAACCTTTTTGCTGCTGGTGTTTCCTGTGTGGGTCCAAATTGCTTTAAGCTGACCCTTTTAATTCTTGCTGGTGTTTGTGCTGCTGGCATCATCTTGGGCACTATCCTGACTTTGAGAATTAAACCGGTTTACCAAATGCTTTATGCTGGAGGTTCTTTCAGGCAGCCTCAAGCATCTTCAAGTCACTAA 1728 0.4259 MLTLKGGTRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLVPGLACNKFPPWLILCVGSLASFLGYGLFWLAISETIKSLPYLLLWFALLIASNSSAWLTTAVLVTNMRNFPVSRGKVAGILKGYGGLSGAVFTEIYSIVLRNNSSNFMLFLAIGIPVICFSMMFLVRPCTPASDEDPAANWHFLFIQGSSVVLGVYLLVTTIFGNALPLSDTVSYILVAVMILILMAPLAIPIKMTLYPRTTSNSDSPEERLGSSDSTIQGRDDKDDKIEPLLASSSAGTLGSFYDEDDSSEVAMLLALGEGAVKQKKRRPKRGEDFKFTEAVVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGEEDTTVLLSIFSFCNFVGRLGGGIVSEYFVRTKTIPRTAWMTCTQIIMLIVYILLAYAINGILYPAVAFLGVCYGTQVSIMIPTISELFGLKHFGVLSNFVAVGNPLGAFLFSALLAGYIYDNEAAKQHGINLFAAGVSCVGPNCFKLTLLILAGVCAAGIILGTILTLRIKPVYQMLYAGGSFRQPQASSSH* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02021 575 MobiDBLite consensus disorder prediction 267 290 - -
Rops11g02021 575 CDD MFS_Mch1p_like 10 543 - -
Rops11g02021 575 Gene3D MFS general substrate transporter like domains 349 558 IPR036259 -
Rops11g02021 575 Pfam Nodulin-like 11 258 IPR010658 -
Rops11g02021 575 SUPERFAMILY MFS general substrate transporter 236 555 IPR036259 -
Rops11g02021 575 SUPERFAMILY MFS general substrate transporter 15 196 IPR036259 -
Rops11g02021 575 Gene3D MFS general substrate transporter like domains 12 202 IPR036259 -
Rops11g02021 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02021 Rops-Chr11 32826732 32830449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02021 2 572 Nodulin-like Gene Family AT1G80530 54.450 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02021 - - gmx:100794012 890.952