Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02011 ATGACGTCACGTTCGGGTGGTGGCGGTGGAAACGGAAGCTCCAGGACCCGAGTGGGGAGATACGAATTGGGTCGGACCTTGGGTGAGGGTAATTTCGCGAAGGTGAAGTTTGCGAGGCACGTGGACACTGGAGATAACGTGGCCATCAAGATTCTTGACAAGGAAAAAGTTCTCAAGCACAAAATGATTGGCCAGATAAAACGAGAAATATCAACAATGAAATTGATTAGACACCCAAATGTCATCCGCATGTATGAGGTGATGGCTAGCAAGACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCACGCAATGGGAGGTTGAAAGAAGATGAAGCAAGAAAATATTTTCAACAGCTTATCTGTGCCGTAGATTACTGTCATAGTAGAGGTGTTTTTCATAGAGACCTAAAGCCTGAGAATTTATTGCTGGATACTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGCGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCGGAGGTGATTCAAAACAAAGGCTATGATGGTGCAAAGGCAGATCTTTGGTCATGTGGTGTTATTCTTTTCGTTTTAATGGCTGGCTATTTGCCCTTCGAAGATAACAATCTTATGGCTTTATATAAAAAGATTTACAAGGCTGAGTTCACATGTCCTCCATGGTTCTCTTCGAGTGCAAAGAAACTAATCAAAAGAATCCTTGATCCAAATCCTGCCACACGGATTACAATTGCTGAGGTCATTGAGAATGAGTGGTTCAAGAAGGGATATAAGCCTCCTGTGTTTGAACAGGCTAATGTTAGTCTTGATGATGTAAATTCTATTTTTAGTGAATCTATGGATTCACAAAATCTTGTTGTTGAGAGGCGTGAAGTGGGGCCTGTGGCACCTACAACCATGAATGCATTTGAGCTTATCTCTAAATCTCAGGGTCTCAACCTTAGTAGTCTTTTCGAGAAGCAAATGGGACTTGTTAAAAGAGAAACAAGATTCACATCCAAATGTTCAGCAAATGAGATAATTTCAAAAATTGAGCAAGCTGCAGGACCTCTGGGTTTTGATGTTAGGAAGAACAACTGTAAGTTAAAGCTTCAAGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTGGAGGTGGCTCCTTCGCTTTATATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATCTATCTACTGGGCTAAAAGATATCGTTTGGAAATCAGAGCCTATCGATGAAGAAAAAGAGGGTACAGGTGCCAGTGCATCAAAATGA 1383 0.4172 MTSRSGGGGGNGSSRTRVGRYELGRTLGEGNFAKVKFARHVDTGDNVAIKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARNGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDTNGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIQNKGYDGAKADLWSCGVILFVLMAGYLPFEDNNLMALYKKIYKAEFTCPPWFSSSAKKLIKRILDPNPATRITIAEVIENEWFKKGYKPPVFEQANVSLDDVNSIFSESMDSQNLVVERREVGPVAPTTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSANEIISKIEQAAGPLGFDVRKNNCKLKLQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLSTGLKDIVWKSEPIDEEKEGTGASASK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02011 460 FunFam Non-specific serine/threonine protein kinase 14 314 - -
Rops11g02011 460 FunFam Non-specific serine/threonine protein kinase 318 443 - -
Rops11g02011 460 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Rops11g02011 460 Gene3D Transferase(Phosphotransferase) domain 1 101 283 - -
Rops11g02011 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Rops11g02011 460 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02011 460 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02011 460 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Rops11g02011 460 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Rops11g02011 460 Gene3D Phosphorylase Kinase; domain 1 11 100 - -
Rops11g02011 460 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 432 - -
Rops11g02011 460 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02011 460 CDD CIPK_C 324 439 - -
Rops11g02011 460 Gene3D Kinase associated domain 1, KA1 318 443 - -
Rops11g02011 460 Pfam NAF domain 320 380 IPR004041 GO:0007165
Rops11g02011 460 CDD STKc_SnRK3 20 275 - -
Rops11g02011 460 SUPERFAMILY Protein kinase-like (PK-like) 18 312 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02011 Rops-Chr11 32657668 32666236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02011 13 452 CBL-interacting serine-threonine protein kinases AT1G01140 70.179 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops11g02011 Pkinase 4.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02011 - - gmx:100788746 836.254