Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02009 ATGTCCCCAGCTGCTAGAACCATAGCTTTGCATTCCCTTTGCACCATCTCTTCTGATAAACCATCATCTCCTTCAAAATCAAGCACCCATTTAGCTGCCAAACCCAAAAGCCTCCTCCATAATCACCCACTTTATACACCAACCCATGCAAAACTTTCCCTTCAATTCAAAGAGAAAATCCTCTGCCTTGAGGTAATGGGTATTGATGCAGGGAAAGCACTTTCCCAAAACCCTGACCTCCACACAGCTACCATGGAATCCATTAATTCCATTATCTCCTTCCTTTTGTCCAAAGGCATCCAGCATCAGGACTTGCCCAGGATCTTTGGCATGTGCCCCAAGATTCTCACCTCTGACTTAAAAAAAGATCTTAATCCAGTTTTTGATTTTCTCTTGCATGACCTGAAAGTCCCAGATCACAGCTTTAGAAGGGCTGTCAAAAAGTGCCCAAGATTGCTTACATCTAGTGTGGTAGACCAACTTAAACCAGCTTTGTTTTACCTAAAGAGACTTGGGTTCAAGGATTTGGAAGCCTTGGCTTATCAAGATTCCGTTCTGTTGGTGTCTAATGTAGAAAGGACCCTCATCCCTAAGCTGAAGTATTTGGAGAATTTGGGATTTTCCAAGGGCGAGGTTAGATGTATGGTGTTGAGATGTCCAGCATTGCTCACTTTCAGCATAGAAAATAATTTTCAGCCAAAGTTTGAGTATTTTTCTGTGGAAATGGGGAGAAAATTGGAGGAGCTGAAAGAATTTCCTCAGTACTTCACTTTTAGTTTGGAGAACAGGATAAAGCCTAGACACATGGAGGTTGTGCAAAGTGGGATCAATTTACCTTTGTCAGTGATGCTTAGAAGCACTGATGAAGAATTTAGGGAGCTGATAAAGCCAAGGGATGGATGA 903 0.423 MSPAARTIALHSLCTISSDKPSSPSKSSTHLAAKPKSLLHNHPLYTPTHAKLSLQFKEKILCLEVMGIDAGKALSQNPDLHTATMESINSIISFLLSKGIQHQDLPRIFGMCPKILTSDLKKDLNPVFDFLLHDLKVPDHSFRRAVKKCPRLLTSSVVDQLKPALFYLKRLGFKDLEALAYQDSVLLVSNVERTLIPKLKYLENLGFSKGEVRCMVLRCPALLTFSIENNFQPKFEYFSVEMGRKLEELKEFPQYFTFSLENRIKPRHMEVVQSGINLPLSVMLRSTDEEFRELIKPRDG* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02009 300 PANTHER CGI-12 PROTEIN-RELATED 25 295 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 Gene3D Transcription termination factor 3, mitochondrial 124 296 IPR038538 -
Rops11g02009 300 FunFam Transcription termination factor MTEF1, chloroplastic 131 298 - -
Rops11g02009 300 SMART mt_12 106 138 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 SMART mt_12 177 208 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 SMART mt_12 213 245 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 SMART mt_12 71 101 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 Pfam mTERF 186 291 IPR003690 GO:0003690|GO:0006355
Rops11g02009 300 Pfam mTERF 63 175 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02009 Rops-Chr11 32654869 32655994 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g02009 mTERF 2.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02009 K15032 - gmx:100788221 472.626