Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01975 ATGTCGGATCGCGAAATGGGAGATGGAGACATTGAAGGCGGTGGTGGAGACGACGGTTTCCGGTCACCGATCGGTCGCAAGTATCGTCCTGTGTTGGCGAACGATCGTGCTGTACTCGAGATGTCTTCCATGGATCCTGGATCTTCTTCTTCCTCTTCTGCTGCTGCTGCAGATCAACCTCCTAATCTCAGGAAAATAAATGTAGGTAAGAGTGCGAATGGGAATTCAGATGCTAAAGAAGGGAACTCTCCTCATCAATCGCAACCTAATGGACCGCAGCAGGAATCTAAACTTGAACTGTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACCGGTGAGCAAGCTGCGGCACCGTCTAGTCCTAGAGATGGTGAGGATATTACCATCACTGCTGGGGTGCCAAAGCCTGCTGCTCCCAAACTGGGTACATTGATGGGTGTATTCATTCCGTGTACACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGCATGGCGGGTATAGGAGAGACATTGTTGCTTGTTGCTTTGTGTGGCACTTGTACATTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCTGAAGTTGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCGGTTGCTGGAGCACTCTACGTATTGGGAGCTGTAGAAACATTTTTGAAAGCGGTTCCTTCTGCTGGGATTTTTAGAGAGACTATCACACAAGTTAATGGTACTGCAATTGCGCAACCAATAGAGAGTCCAAGTTCTCATGACCTGCAAATTTATGGGATTGTTGTGACTATTGTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCTTTTCTCGTACCTGTTTTATTCTCACTTGTCTGCATATATTTGGGAATTCTTTTGGCAAGGAAGGATGATCCCACAGAGGGAATTACTGGGTTGAGTTTGGAGACAATTAAAGAAAATTGGAGTTCAGATTATCAAAAGACTAATGATGCTGGAATTCCAGAAACTGATGGCTCCGTAACCTGGAATTTCAACTCATTGGTGGGGCTCTTTTTCCCAGCTGTAACGGGAATAATGGCAGGTTCTAATCGATCAGCTTCGCTGAAAGATACTCAGCGATCAATTCCTATTGGAACCTTGGCAGCAACTCTTGTAACTTCATGTATGTATCTTGTTTCTGTGATAATGTTTGGTGCCCTTGCCACTAGAGAGAAGCTTTTAACTGACAGGCTTCTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTGATTAAAATTGGGATTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGTCTGACTGGTGCCCCACGTCTGCTAGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAATTACTTTAAAGTTGCAGATGGCAGTGAACCACATGTTGCTACCCTTTTTACTGCTTTCCTGTGTATTGGATGTGTCGTTATTGGGAATCTGGATCTTATCACTCCAACTGTAACTATGTTTTTCCTTCTATGTTATTCTGGTGTCAACTTATCCTGTTTCCTTCTCGATCTTCTGGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTCTGTCACTTGTGGGAGCATTACTTTGCATAGTGATCATGTTCTTAATCTCTTGGTCATTCACTGTGGTGTCTTTCGCCCTTGCAAGCCTCATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAGCTAGCACTTCGTAGCCTTCGGTCGCTAGGAGCAAGTCAAGTGCACCCTAAGAATTGGTACCCAATTCCACTAGTGTTTTGCCGTCCCTGGGGCAAACTGCCTGAAAATGTTCCCTGTCATCCCAAACTTGCTGACTTTGCTAATTGTATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGGCTGCTTGTAAACAACTTAGTACCTATATTGATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTGGTAGCCCCTAACATGTCTGAAGGCTTTCGTGGCATCGTTCAGACAATGGGCCTTGGTAATCTCAAGCCGAATATTGTGGTGATGCGTTACCCAGAAATTTGGCGTCGGGAGAACTTAACGGAAATCCCTGCCACCTTTGTTGGGATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCAAATGTGTACCAGAAGCAGTATGGTACAATTGATTTGTATTGGATTGTAAGAGATGGTGGTCTCATGCTCCTCCTCTCTCAATTGCTTCTTACCAAGGAGAGCTTTGAGAGTTGCAAGATTCAGGTTTTCTGTATTGCAGAAGAGGATGCAGACGCAGAGGGACTAAAAGCTGATGTGAGAAAATTCCTTTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACAATGAAATGGGATGCACAAACGGATGGTGGGTCTCCACAAGATGAATCATTAGAAGCATTTACTGGTGCTAAGCAAAGAATTGATGATTATTTAACTCAGATGAAGGCAGTAGCAGAGAAAGAAGGTACCCCTCTAATGGCAGATAATAAGCCTGTGGTTGTTAACGAGATGCAGGTCGAGAAGTTTCTATACACAACACTTAAGCTCAATTCAATAATTTTGAGATACTCTAGAATGGCTGCAGTTGTTTTGGTAAGTCTTCCTCCACCTCCACTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTGCTTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 2979 0.4361 MSDREMGDGDIEGGGGDDGFRSPIGRKYRPVLANDRAVLEMSSMDPGSSSSSSAAAADQPPNLRKINVGKSANGNSDAKEGNSPHQSQPNGPQQESKLELFGFDSLVNILGLKSMTGEQAAAPSSPRDGEDITITAGVPKPAAPKLGTLMGVFIPCTQSILGIIYYIRFSWIVGMAGIGETLLLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIAQPIESPSSHDLQIYGIVVTIVLCFIVFGGVKMINRVAPAFLVPVLFSLVCIYLGILLARKDDPTEGITGLSLETIKENWSSDYQKTNDAGIPETDGSVTWNFNSLVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLVTSCMYLVSVIMFGALATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCIVIMFLISWSFTVVSFALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKAACKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDADAEGLKADVRKFLYDLRMQAEVFVITMKWDAQTDGGSPQDESLEAFTGAKQRIDDYLTQMKAVAEKEGTPLMADNKPVVVNEMQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLSHPAYFYMEYMDLLLENVPRILLVRGYRRDVVTLFT* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01975 992 MobiDBLite consensus disorder prediction 43 58 - -
Rops11g01975 992 Pfam Solute carrier family 12 661 782 IPR018491 GO:0006811|GO:0016020|GO:0022857
Rops11g01975 992 Pfam Solute carrier family 12 793 991 IPR018491 GO:0006811|GO:0016020|GO:0022857
Rops11g01975 992 MobiDBLite consensus disorder prediction 1 95 - -
Rops11g01975 992 MobiDBLite consensus disorder prediction 1 15 - -
Rops11g01975 992 FunFam Cation-chloride cotransporter 1 145 609 - -
Rops11g01975 992 MobiDBLite consensus disorder prediction 66 95 - -
Rops11g01975 992 NCBIfam K-Cl cotransporter 82 992 IPR004842 GO:0006811|GO:0015377|GO:0016020
Rops11g01975 992 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 91 989 IPR004842 GO:0006811|GO:0015377|GO:0016020
Rops11g01975 992 Gene3D Amino acid/polyamine transporter I 144 609 - -
Rops11g01975 992 Pfam Amino acid permease 152 627 IPR004841 GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01975 146 992 Inorganic Solute Cotransporters AT1G30450 83.608 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01975 K14427 - gmx:100795205 1726.45