Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01954 ATGTGGGTAGCTGAAGAATTGTTCTCATTTTCTTGTTGGGGTGGCTTTGGATTCAACTGGGTCTTCAAATTTTTTTGCACTTTTGTTTCCTTAGAAACCCAGATGGGGAACGTTTATTTGGCATATTTGGTGGTGGTGTTGTTTTGCTTGGGGATGCTTGTACCTTGCTTTTGTCAAGATGATTCAGATGATGCTACTACAGATGTGTATGTTGTTACTCTGAGACATGCTCCTGCTTCTCATTACTATGGTGAGTTGAAAAGTGTGGATAATGGCTTCAAAAAGGATGCATCTGGGAGAACTCAATTTCACAAACCAAGATATGACAATATTACAAAGACAGATAGGAGACATGGCTCTTACATTGCTCGAGTTCATGATTCTTTGTTGAAGAAAGTGTTAAGACGAGAGAAATATCTGAAGCTCTACAGCTACCATTACCTGATAAATGGATTTGCTGTGCTGGTTACCCAACAGCAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGTGGTTTTGGATTTTTCTATAAGAACTGCAACTACCCATACTCCACAATTTTTGGGTCTTCCACAGGGAGCATGGTATCAAGATGGTGGGTTTGAAACTGCTGGAGAAGGAGTTGTTATTGGGTTTATTGACACTGGCATAGATCCAACACACCCTAGTTTTGGTGATAATAAATATGAACATCCATATCCTATTCCTGCTCATTTTTCTGGCATCTGTGAGGTTACTCGTGATTTTCCATCTGGTTCTTGCAATAGGAAACTTGTTGGGGCCCGTCATTTTGCAGCATCTGCTATAACCAGGGGAATATTCAATTCAACTCAAGACTATGCTTCTCCCTTTGATGGTGATGGCCATGGCACGCATACAGCATCAGTTGCAGCAGGAAACCATGGGATTCCAGTAGTTGTTGCTGGGCATCACTTCGGCAATGCTAGTGGGATGGCTCCCCGTTCACACATTGCTGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCTTGTCAATCACTCCTAATAGGCGTCCTCCAGGTGTTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTATAAAGGCTGGTATTTTTGTAGTGCAAGCCGCAGGAAATACTGGACCATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCCGCCTCTCATGACCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTGGCACAGATGAAAACAAACTATATAAACTAATTCATGCCCACCATGCTTTGAACAATGACACAAAGGTTGCTGATGATATGTACGTTGGTGAGTGCCAAGATTCAAGTAAGTTCAATAAGGATTTGATCCAGGGAAACCTCTTGATCTGCAGCTATTCAATTCGATTTGTGCTGGGGCTCTCCACTATCAAACGGGCCTCAGAAACAGCAAAGAACCTCAGTGCTGCTGGTGTTGTCTTCTATATGGATCCTTTTGTGATTGGCTTTCAGCTTAACCCTGTCCCAATTAAAATGCCCGGCATAATAATTGCATCCTCAAATGACTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATAGATGCAGTTTCAAAGAAAGTTGTTAAATTCGGGGCCATTGCCACTATCTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCGAACTTGTTAGCTCCTGGAAATTTTATTTGGGCTGCTTGGAGTTCTCTTGGCACTGATTCTGTCGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGTATGGCTGCACCACATGTTGCTGGTCTTGCTGCGCTAATTAGGCAAAAGTTCCCCAATTTCAGTCCTGCAGCCATTGGATCTGCTCTTGCTACTACTGCTACTCTGTATGACAAGAGTGGTGGTCCAATAATGGCTCAGCGATCATATGCCTCTCCAGACCTAAACCAATCTCCCGCAACTCCTTTTGACATGGGAAGTGGTTTCGTGAATGCAACCGCTGCATTGAATCCAGGCTTGATTTTTGATTCCAGTTATGATGATTACATGTCATTTCTATGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACTGGTCTAAGTTGTGGGCTTTATAATTCAACTATATATGGTCCTGATCTGAACTTGCCCTCAATCACTATATCAAAGCTAAACCAATCTAGAGTAGTGCAGAGGACAGTCCAAAACACTGCAGGAAATGAAACTTACAGTGTTTGTTGGAATGCTCCTTTTGGAGTTTCAGTGAAAGTATCTCCAACTCACTTTTCTATTGCCAATGGTGAGAGGCAGGTCTTGTCTGTTCTCTTGAATGCAACCATCAACAGCTCTGTTGCCAGCTTTGGGAGGATTGGGCTGTTTGGTAATCAAGGTCATGTTGTCAATATTCCTCTTTCAGTCATGGTTAAAATCTCACAAAACATCACTACAAGCTAA 2643 0.426 MWVAEELFSFSCWGGFGFNWVFKFFCTFVSLETQMGNVYLAYLVVVLFCLGMLVPCFCQDDSDDATTDVYVVTLRHAPASHYYGELKSVDNGFKKDASGRTQFHKPRYDNITKTDRRHGSYIARVHDSLLKKVLRREKYLKLYSYHYLINGFAVLVTQQQAEKLSRSSEVSNVVLDFSIRTATTHTPQFLGLPQGAWYQDGGFETAGEGVVIGFIDTGIDPTHPSFGDNKYEHPYPIPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTASVAAGNHGIPVVVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAIKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGVGLAPGTDENKLYKLIHAHHALNNDTKVADDMYVGECQDSSKFNKDLIQGNLLICSYSIRFVLGLSTIKRASETAKNLSAAGVVFYMDPFVIGFQLNPVPIKMPGIIIASSNDSKILMQYYNSSLEIDAVSKKVVKFGAIATICGGLKANYGNAAPKVMYYSARGPDPEDSLPHEADILKPNLLAPGNFIWAAWSSLGTDSVEFLGENFAMMSGTSMAAPHVAGLAALIRQKFPNFSPAAIGSALATTATLYDKSGGPIMAQRSYASPDLNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSAPVVLNYTGLSCGLYNSTIYGPDLNLPSITISKLNQSRVVQRTVQNTAGNETYSVCWNAPFGVSVKVSPTHFSIANGERQVLSVLLNATINSSVASFGRIGLFGNQGHVVNIPLSVMVKISQNITTS* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01954 880 Gene3D - 747 872 - -
Rops11g01954 880 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 56 180 IPR037045 -
Rops11g01954 880 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 212 223 IPR023827 -
Rops11g01954 880 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 137 868 IPR045051 -
Rops11g01954 880 SUPERFAMILY Subtilisin-like 182 734 IPR036852 GO:0004252|GO:0006508
Rops11g01954 880 PRINTS Subtilisin serine protease family (S8) signature 207 226 IPR015500 -
Rops11g01954 880 PRINTS Subtilisin serine protease family (S8) signature 287 300 IPR015500 -
Rops11g01954 880 PRINTS Subtilisin serine protease family (S8) signature 652 668 IPR015500 -
Rops11g01954 880 ProSitePatterns Serine proteases, subtilase family, serine active site. 653 663 IPR023828 -
Rops11g01954 880 ProSiteProfiles Serine proteases, subtilase domain profile. 187 730 - -
Rops11g01954 880 CDD PA_subtilisin_like 431 563 - -
Rops11g01954 880 Pfam Peptidase inhibitor I9 69 182 IPR010259 -
Rops11g01954 880 CDD Peptidases_S8_3 182 689 IPR034197 -
Rops11g01954 880 Gene3D - 422 590 - -
Rops11g01954 880 FunFam Subtilisin-like protease SBT1.5 209 431 - -
Rops11g01954 880 Pfam Fibronectin type-III domain 776 869 IPR041469 -
Rops11g01954 880 Gene3D Peptidase S8/S53 domain 209 743 IPR036852 GO:0004252|GO:0006508
Rops11g01954 880 Pfam Subtilase family 207 693 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01954 Rops-Chr11 31525113 31533708 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01954 44 874 Subtilisin-like Serine Gene Family AT4G20430 70.107 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01954 - - gmx:100796456 1526.53