Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01947 ATGTCGTCGGAGGAGAAGAGATTCCGCTGGAGGGAGGTTGAAATCGAAACCCATGGTCTTGATACCTTCCTTTTGAAGCCGTCGGAGGAGAAGAGATGCGTCGGTCTGAAAAGGAGCTGTGGTGAAATCTGTGAAGGATTTGGGTTGTGGACTGATATATTTGGCAGCAGCAAAATGGCATCTGATCTAAATTCAGGGTTGTCTAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTATTAATGGGAATAATAGTTGGGTTGTTCATTATAATCATTCTTGTGGTGCTATCAATATGCCTTACTTTAAGAAAGAAGTCCAGAAGAGTCAATGGCAAGCTTCCGCTTAGCCATGTGTTATCTGTTTCAGAAGAGATCAAAGAAATTAGAGTTGATCAAGTTTCAGCAAATAATCATCTGCAAAATGGTGCTTTTATGAGTCTTAATGACAAATTTGGTGGTGGGGAACCTGAAAAGGTTTTGATCCAAACAAAGAATGGGGATAATAGTAGTCAATCAGGCTCATTTAATCATTTAGAGAAAGATGCAAACGGCTCTCAATCAGGTGAAGAAAGTGGTGTTAAGAGCATTTCAGCTTATAGGTCTTCTTCGCATCCTATAACTGCGCCATCCCCTTTGTTTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGTCACTGGTTTACATTAAGGGACCTAGAACTTGCTACGAACAGGTTTTCAAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCGAGGTCAACTCATCAATGGGAGTCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAGGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTATTGGTTTATGAGTATGTTAACAATGGTAATTTAGAGCAGTGGCTTCATGGAGCCATGCGGCAGCATGGTTTTCTTACTTGGGGGGCTCGGATTAAAATTCTCCTTGGAACAGCCAAAGCATATGTTGCTCCAGAATATGCCAATTCTGGCTTGCTAAACGAGAAGAGTGATGTGTATAGCTTTGGGGTGTTGCTCCTTGAAGCAATTACAGGAAGAGACCCAGTGGACTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGTGTAGGCGCTCAGAAGAGGTGGTGGACCCTAACATTGAGACTAGGCCATCAACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTCCGCATGCTTGAATCGGAGGAATATCCCATACCTCGAGAGGATCGAAGAAGGCGAAGGAGTCAGGCAGGAAACACAGAGCTAGAGACCCAGAGGGAGACTTCTGATACAGATAAGAGTGACAATCCTGATTCTAAGCCCAATGGCAGGAGGAACCAATGA 1512 0.4372 MSSEEKRFRWREVEIETHGLDTFLLKPSEEKRCVGLKRSCGEICEGFGLWTDIFGSSKMASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILVVLSICLTLRKKSRRVNGKLPLSHVLSVSEEIKEIRVDQVSANNHLQNGAFMSLNDKFGGGEPEKVLIQTKNGDNSSQSGSFNHLEKDANGSQSGEESGVKSISAYRSSSHPITAPSPLFGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQHGFLTWGARIKILLGTAKAYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRRSEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRRSQAGNTELETQRETSDTDKSDNPDSKPNGRRNQ* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01947 503 MobiDBLite consensus disorder prediction 163 197 - -
Rops11g01947 503 FunFam Putative receptor-like protein kinase 222 315 - -
Rops11g01947 503 PANTHER OS01G0323000 PROTEIN 62 350 - -
Rops11g01947 503 MobiDBLite consensus disorder prediction 442 503 - -
Rops11g01947 503 FunFam Putative receptor-like serine/threonine-protein kinase 348 470 - -
Rops11g01947 503 ProSiteProfiles Protein kinase domain profile. 240 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01947 503 ProSitePatterns Protein kinases ATP-binding region signature. 246 269 IPR017441 GO:0005524
Rops11g01947 503 Pfam Protein tyrosine and serine/threonine kinase 243 328 IPR001245 GO:0004672|GO:0006468
Rops11g01947 503 Pfam Protein tyrosine and serine/threonine kinase 350 454 IPR001245 GO:0004672|GO:0006468
Rops11g01947 503 MobiDBLite consensus disorder prediction 161 197 - -
Rops11g01947 503 Gene3D Phosphorylase Kinase; domain 1 222 315 - -
Rops11g01947 503 SUPERFAMILY Protein kinase-like (PK-like) 224 462 IPR011009 -
Rops11g01947 503 Gene3D Transferase(Phosphotransferase) domain 1 348 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01947 Rops-Chr11 31406912 31420501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01947 227 458 Trihelix Transcription Factor Family AT5G38560 37.884 1.86e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Rops11g01947 PK_Tyr_Ser-Thr 2.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01947 - - vum:124826827 707.983