Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01945 ATGGCAGGAACTGTTGTGGGTGGAGCTTTCCTCTCTGCTTTTGTTAATGTTCTTTTTAATAGGCTCTCTTCTCCCGAGTTTATCAACTTGATCCGAGGCAAGAAGCTTGACCACAAGCTGCTTGAAAGGTTGGAGACTACCCTTTATGCTGTTCAGGCTGTGCTCAATGATGCTGAGCGTAAACAGATCAATGACCCTGCTGTGAAGAAATGGCTTGATAAACTCCAAAATGCTTTCTATGTGGCTGATGACTTGTTGGACGAAGTTTTCACTGAAGCTGCCATTCAAAAGGAGGTAAGTAACTTCTTGTCTCGATTTCTCAATTTGCGAGATAGGAAGGTGGTAAAAGAGATTGAAGACATCACTAGCAGGCTAGAATATATTGTGCAATCCAAAAATACTCTTGGCCTGGAAAATATTGCTAGTGAGAACTTCTCTTGGAGAAAACAAGAGTCATCATCCGTAATAAAAGGGGAAATATATGGCAGGGAAAATGATCAAGATGCCATAATGAAAATATTGAATGACAGTGGTGAAGATAAGATATCTGTGATTCCAATTGTGGGCATGGGTGGGGTCGGAAAGACCATTTTAGCCGGGTGGGTGTATAATAATGAGAATTTGATGAAGGAGTTTGATTTGAAAACATGGGTTTGTGTCTCTGAAGAATTTGATGTTGTTAACATTACAAAGGATATAATTAAGGGAATTACTTCTGGAGTTTGTGATGATAAAGATTTCAATTTACTTCAACTTGATTTGAAGGAAAAGCTGTTGAGAAAGAAATTCTTTGTTGTCTTGGATGATGTTTGGAGTGATGATTATAATTGTTGGAATAGTCTTAAAGCACCTTTTCAATATGGGACCAAGGGAAGTAAAATCCTTGTAACAACTCGTAACGAAAAGGTAGCTTCAGTTGTCCAAACATGTCCACCTTACTATTTGAATCTTTTGTCTGATGAACATTGCTGGTCAGTGTTTGCAGAGCATGCACGTTTTCCAGAATCAAATTGGAATTCATCTCTAGGAGGAATTGGAAGAGAGATTGTGAAGAAGTGTAATGGATTACCTTTAGCTGCACAAACACTTGGAGGCCTATTGCGAGCTACATGTGACATCGAGTACTGGAATTCTATATTGCACAGTGACATTTGGGAATTGTCTAACAGTAAAATTATTCCAGCATTGAGAATAAGTTATTACCATCTCCCTCCACATTTAAAACGTTGTTTTGCTTCTTGTTCATTGTATCCCAAGGATTATGAATTTGATAAAGATGAATTAATCTTGTTGTGGATGGCAGAAGGTCTTTTACGGGCACCAAAGAGAGGAGAGACATTGGAAGATGTTGGTTCTGAGTGTTTTGATGATTTAGCTTCCAGATCATTTTTCAAACAACATGGTACTCGTAGTAATCGTTTTGTGATGCATGATCTGATGCATGACCTAGCAATATCTGTTGCTGGAGACTTCTATTTTAGATCAGAAGAGCTTGGGAATGCATCTGATGTTAACATTCATACTCGTCATCTGTCATATGGAAGGTTGAGTTATCCTATCTCAAAAAATTTTGATGCCATCAATAAATTAAAGTCATTGAGGACTTTTCTGCAAATCAATTTCTCTGATCCCTCATTCAGCTTTGAAAGTGCAGCATCGATCATATTACCCAAGTTTAAGCGGCTGAGAGTTTTGTCATTTTTTGAATGTCGGGAGCTTGAGGTAATTCCTGATTCAATAGGTGAACTGATCCATCTGCGTTACTTGGATCTCTCTAGGACAAGTATCAAGACATTGCCAGAATCATTGAGTAAGTTGTACAATCTACAGACATTGAAGCTTTTTCGATGTCAAAAGCTGACTATGCTGCCAAGTGGCATGCAAAATCTTGTGAACTTGCGACATCTTGATATCAGAGGAACTAGTTTGAAAGAGATGCCTCTGGGAATGAGCAAACTAAAAGATTTGCAGTTTTTAACTGAATTTGTTGTGGGCGAGCATGAAGAGAATGGGATCAAGGAATTGGGAGAGCTTTCAGATCTTCATGGATCACTAGCGATTAGCAAATTGGAGAATGTTACCAATAGTGGTGAAGCAGGGGAGGCACAGATAATGGATAAGACCCACATTGATGATTTGTTATTGGAATGGTCTTCGGGTGTTGATATGGTTACGACCTCGACACACATTGAAAGAGAAATATTGGACAAGTTACAACCTCACGAAAGCCTGAAAGTTCTAACAATCAAGAGGTACAGGAGTACAAGATTTCCAGATTGGGTGGGACATTCTTCCTTCCACAAAATGACTCGTATAATTCTTGAGTCTTGTAGCAATTGTTGTTTGCTTCCATCACTTGGACAACTACCTTCTCTCAAGACCTTGCGGATTGAAGATTTTAATGGGGTGGAGACAATTGGTGCCGAGTTTTACAAGAATGATAATGATCATTGTCCTTTGGAAACACCATTTCCATCCTTGGAGGATCTGTCATTTCATAAAATGCCATGTTGGAAGGTGTGGCATTCCTCAGGATCAAATGCTTTTCCTCAACTTAAGCAGCTTAGAATAGATGATTGTCCCATATTAGAGGGACGTTTGCCTAGTCCCCTTCCTGCTTTGGAAACACTTGACATTCGTGGATGCATGGAGCTTGTTTCTCCTCTACCACGTGCTCCCATGATTCGTGAATTGACGATATCTGGAAGCGATAAAGCATTTATGGTAGTGGAATGGGATATCAAAGTGGCTAAGTTGCCTGTTGATTCTGCTGGAAATGTCAAGCTTGCTGCCTTTGGTTCGGCCAATCATGCTGTTGCTGTTGGAAAGGCTCTCTTCAAGCCACACGTAGAAGGTCATCTTAAGGTGAACACAATCATGTTCTTGTCTTGGTCCGACAGCAGATATGGTGCTTTAACTCGTTTCCAATCTGAAAATGCCCTTTTGCTTTGTACAATATTAAATATTGGTGCTTTGCCTGTTGAGGCGCGATTTTGCAGAGCTGGCACAGATGAAAACAAACTATATAAACTAATTCATGCCCACCATGCTTTGAACAATGACACAACGGTTGCTGATGATATGTATGTTGTTAAGTGCCAAGATTCAAGTTCGGTCAATAAGGATTTGATCCAGGGAAATCTCTTGATCTGCATCTATTCAATTCGATTTGTGCTGGGGCTCTCCATTATCAAACGGGCATCAGAAACACCAAAGAACCTTAGTGCCGCTGGTGTTGTCTTCTATATGGATCCTTTTGTGATTGGTTTTCAGCTTAACCCAGTCCCAATGAAAATGCCTGGCATAATAATTGCATCCTCAAATGACTCCAAGACCGTTGAAAAAGCTCTCTTCATGCCACATGTAGAAGATCATCTTACGACTTCAGAAGAAGATTATGTCAACCCTGAACTGGCTGCACAACACTTCTGCTGA 3435 0.3994 MAGTVVGGAFLSAFVNVLFNRLSSPEFINLIRGKKLDHKLLERLETTLYAVQAVLNDAERKQINDPAVKKWLDKLQNAFYVADDLLDEVFTEAAIQKEVSNFLSRFLNLRDRKVVKEIEDITSRLEYIVQSKNTLGLENIASENFSWRKQESSSVIKGEIYGRENDQDAIMKILNDSGEDKISVIPIVGMGGVGKTILAGWVYNNENLMKEFDLKTWVCVSEEFDVVNITKDIIKGITSGVCDDKDFNLLQLDLKEKLLRKKFFVVLDDVWSDDYNCWNSLKAPFQYGTKGSKILVTTRNEKVASVVQTCPPYYLNLLSDEHCWSVFAEHARFPESNWNSSLGGIGREIVKKCNGLPLAAQTLGGLLRATCDIEYWNSILHSDIWELSNSKIIPALRISYYHLPPHLKRCFASCSLYPKDYEFDKDELILLWMAEGLLRAPKRGETLEDVGSECFDDLASRSFFKQHGTRSNRFVMHDLMHDLAISVAGDFYFRSEELGNASDVNIHTRHLSYGRLSYPISKNFDAINKLKSLRTFLQINFSDPSFSFESAASIILPKFKRLRVLSFFECRELEVIPDSIGELIHLRYLDLSRTSIKTLPESLSKLYNLQTLKLFRCQKLTMLPSGMQNLVNLRHLDIRGTSLKEMPLGMSKLKDLQFLTEFVVGEHEENGIKELGELSDLHGSLAISKLENVTNSGEAGEAQIMDKTHIDDLLLEWSSGVDMVTTSTHIEREILDKLQPHESLKVLTIKRYRSTRFPDWVGHSSFHKMTRIILESCSNCCLLPSLGQLPSLKTLRIEDFNGVETIGAEFYKNDNDHCPLETPFPSLEDLSFHKMPCWKVWHSSGSNAFPQLKQLRIDDCPILEGRLPSPLPALETLDIRGCMELVSPLPRAPMIRELTISGSDKAFMVVEWDIKVAKLPVDSAGNVKLAAFGSANHAVAVGKALFKPHVEGHLKVNTIMFLSWSDSRYGALTRFQSENALLLCTILNIGALPVEARFCRAGTDENKLYKLIHAHHALNNDTTVADDMYVVKCQDSSSVNKDLIQGNLLICIYSIRFVLGLSIIKRASETPKNLSAAGVVFYMDPFVIGFQLNPVPMKMPGIIIASSNDSKTVEKALFMPHVEDHLTTSEEDYVNPELAAQHFC* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01945 1144 SUPERFAMILY L domain-like 475 890 - -
Rops11g01945 1144 Coils Coil 41 61 - -
Rops11g01945 1144 FunFam Probable disease resistance protein At1g61300 144 310 - -
Rops11g01945 1144 PRINTS Disease resistance protein signature 353 367 - -
Rops11g01945 1144 PRINTS Disease resistance protein signature 184 199 - -
Rops11g01945 1144 PRINTS Disease resistance protein signature 257 271 - -
Rops11g01945 1144 PRINTS Disease resistance protein signature 869 885 - -
Rops11g01945 1144 Gene3D - 147 310 IPR027417 -
Rops11g01945 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 414 IPR027417 -
Rops11g01945 1144 Gene3D Ribonuclease Inhibitor 519 905 IPR032675 -
Rops11g01945 1144 Pfam NB-ARC domain 164 381 IPR002182 GO:0043531
Rops11g01945 1144 Gene3D - 399 486 IPR036388 -
Rops11g01945 1144 SMART LRR_typ_2 583 606 IPR003591 -
Rops11g01945 1144 SMART LRR_typ_2 630 653 IPR003591 -
Rops11g01945 1144 Pfam Rx N-terminal domain 10 98 IPR041118 -
Rops11g01945 1144 Gene3D - 317 398 IPR042197 -
Rops11g01945 1144 Gene3D - 17 128 - -
Rops11g01945 1144 PANTHER DISEASE RESISTANCE PROTEIN RP 41 882 IPR044974 GO:0006952
Rops11g01945 1144 FunFam Probable disease resistance protein At1g63360 400 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01945 Rops-Chr11 31358935 31369804 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01945 1003 1130 Subtilisin-like Serine Gene Family AT5G44530 56.250 5.51e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01945 - - aprc:113853040 1161.75