Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01944 ATGGCTCAGCGATCATATGCCTCTCCAGACCTAAACCAATCTCCCGCAACTCCTTTTGACATGGGAAGTGGTTTCGTGAATGCAACCGCTGCATTGAATCCAGGCTTGATTTTTGATTCCAGTTATGATGATTACATGTCATTTCTATGTGGTATCAATGGATCAGCTCTTGTGGTGCTAAACTACACTGGTCTAAGTTGTGGGCTTTATAATTCTACTATATATGGTCCTGATATGAACTTGCCCTCAATCACCATATCAAAGCTAAACCAATCTAGAGTACTGCAGAGGACAATCCAAAACATTGCAGGAAATGAAACTTACAGTGTTAGTTGGAATGCTCCTTATGGAGTTTCAGTGAAAGTATCTCCAACTCATTTCTCTATTGCCAATGGTGAGAGACAGGTCTTGTTCATACTCTTAAATGCAACCATCAATAGCTTTGTTGCTAGCTTTGGGAGGATTGGGTTGTTTGGTAATCAAGGTCATGTTGTCAATATTCCTCTTTCAATCATGGTTAAGATCTCACAAAACATCACTACAAGCTATCAGGGATAG 558 0.4014 MAQRSYASPDLNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSALVVLNYTGLSCGLYNSTIYGPDMNLPSITISKLNQSRVLQRTIQNIAGNETYSVSWNAPYGVSVKVSPTHFSIANGERQVLFILLNATINSFVASFGRIGLFGNQGHVVNIPLSIMVKISQNITTSYQG* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01944 185 Gene3D Peptidase S8/S53 domain 11 45 IPR036852 GO:0004252|GO:0006508
Rops11g01944 185 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 169 IPR045051 -
Rops11g01944 185 Gene3D - 49 174 - -
Rops11g01944 185 Pfam Fibronectin type-III domain 78 171 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01944 Rops-Chr11 31354318 31355957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01944 1 176 Subtilisin-like Serine Gene Family AT4G20430 64.773 7.89e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01944 - - gmx:100796456 320.087