Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01943 ATGCAGCATACAGCATCTGTTGCAGCAGGAAACCATGGGATTCCAGTGATTGTTGCTGGGCATCACTTTGGGAATGCTAGTGGGATGGCTCCACGTTCACACATTGCCATTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCCTGTCAATCACTCCTAATAGGCGTCCTCCAGGCGTTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAGGCTGGTATTTTTGTCGTGCAAGCTGCAGGAAATACTGGACCATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCCGCCTCTCATGACCGGGTTTATAACAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTGGCACAGATGAAAACAAACTATATAAACTAATTCATGCCCACCATGCTTTGAACAATGACACAATGGTTGCTGATGATATGTACGTTGGTGAGTGCCAAGATTCAATTTCAAAGAAAGTTGTTAAATTTGGGGCCATTGCCACTATCTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCGAACTTGTTAGCTCCTGGAATTTTATTTGGGCTGCTTGGAGTTCTCTTGGCACTGATTCTGTCGAATTTCTAG 792 0.4457 MQHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAIYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGAASHDRVYNNSIFLGNNVTIPGVGLAPGTDENKLYKLIHAHHALNNDTMVADDMYVGECQDSISKKVVKFGAIATICGGLKANYGNAAPKVMYYSARGPDPEDSLPHEADILKPNLLAPGILFGLLGVLLALILSNF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01943 263 Gene3D Peptidase S8/S53 domain 3 130 IPR036852 GO:0004252|GO:0006508
Rops11g01943 263 ProSiteProfiles Serine proteases, subtilase domain profile. 1 263 - -
Rops11g01943 263 Pfam Subtilase family 9 246 IPR000209 GO:0006508|GO:0008236
Rops11g01943 263 Gene3D - 131 188 - -
Rops11g01943 263 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 193 IPR045051 -
Rops11g01943 263 SUPERFAMILY Subtilisin-like 3 247 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01943 Rops-Chr11 31349417 31353996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01943 3 249 Subtilisin-like Serine Gene Family AT5G44530 66.802 2.50e-105 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01943 - - gmx:100820468 340.117