Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01941 ATGGATTTGCTATGCTGGTTACCAACAGCAGAGGGGAAAATAAGGTATTTTTGCCATTTGAGAAATGACTGTTTTGGCACTTCAAAACCGAAGCAAAACTCCTTAAAATATGTGGCCAAATTTCTGAACCAAAATAGATTTATGTCCAACCAACATGCCGTTTACAAGGCATTATACAGGAGCTTTGGAGGATTCGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCTTGTCAATCACTCCTAATAGGCGTCCTCCAGGCGATGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGTTGTAAAGGCTGGTATTTTTGTCGTGCAAGCTGCAGGAAATACTGGACCATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCCGCCTCTCATGACCGGGTTTATGGCAACTCCATATTTCTTGGAAATAATTTGACCATACCTGGTGTTGGACTTGCACCTGACACAGATGAAAACAAACTATATAAACTAATTCATGCCCACCATGCTTTGAACAATGACACAACGGTTGCTGATGATATGTACGTTGTTGAGTCCCAAGATTCAAAAACAGCAAAGAACCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCTTTTGTGATTGGTTTTCAGCATAACCCAGTCCCAATGAAAATGCCCGGCATAATAATTGCATCCTCAAATGACTCCAAGACTGTTGAAAAATCTCTCTTCATGCCACATGTAGAAGATCATCTTACGTTGAACACAATCATACTGCAGAAGAAGATTATGTCAACCCTGAACTGGCTGCACAACACTTCTGCTGATTACCAGGCCAGATTATCATCATACGGACAACATTATATGACATTCAGTTCATAG 915 0.4175 MDLLCWLPTAEGKIRYFCHLRNDCFGTSKPKQNSLKYVAKFLNQNRFMSNQHAVYKALYRSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGDATFFNPIDMALLSVVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGAASHDRVYGNSIFLGNNLTIPGVGLAPDTDENKLYKLIHAHHALNNDTTVADDMYVVESQDSKTAKNLSAAGVVFYMDPFVIGFQHNPVPMKMPGIIIASSNDSKTVEKSLFMPHVEDHLTLNTIILQKKIMSTLNWLHNTSADYQARLSSYGQHYMTFSS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01941 304 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 299 IPR045051 -
Rops11g01941 304 Pfam Subtilase family 56 299 IPR000209 GO:0006508|GO:0008236
Rops11g01941 304 Gene3D - 148 287 - -
Rops11g01941 304 SUPERFAMILY Subtilisin-like 52 180 IPR036852 GO:0004252|GO:0006508
Rops11g01941 304 Gene3D Peptidase S8/S53 domain 53 147 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01941 Rops-Chr11 31329169 31333120 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01941 53 252 Subtilisin-like Serine Gene Family AT5G44530 65.948 3.25e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01941 - - gmx:100820468 320.472