Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01920 ATGGATGGGGTTACTGTTAAGGCTGAGCCAGAGCAGATCATGGCTCTAGAATCTTCTCCTTCTGCTGTGGAGAATCATGGTTACAGTGTTGATGGGGTTAGTACCAAAGTGGAGGAACACCTGGTCCAAGACAACGTGGGTGATGCGTCAACGATGCATCTCTCAGCAAACAAGTCAATGCCAGCATCTGGACTGAATGCAGTGATTCCTAATACAAGTCAGCTTACCATTTTCTATAATGGGAGTGTTTGTACCTATGATGGAATACCTGCAGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTACTGCTGCCGCTGCCAAGTCTTCTGAAATGAAGAAGATGGGGATACAAACTCCCATCCTTTCACCTGTTCCCTCAAGGCCTTCTTCTCCACATGGAGCCACTAATAATGTTGCTTCATCACAGGGACTCTGCTTTCCTGCAAAGAAGAGTTCCATCTGCAGGCTGCAAGAATTTCCGATTGCACGTAGACATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGACAGGCTGGGGAGCAAAGCCCCTTATCCTTCCTCACCAACAACAAAAGTGGCTGACAACATAGAGAACAACTTCTGTGCTGACAATGCACTGGATTTGGTTTCCTTGAAACAACCAAAGGAGGAATTTCAGCCAACTATCTCTGCCTCTTGA 684 0.462 MDGVTVKAEPEQIMALESSPSAVENHGYSVDGVSTKVEEHLVQDNVGDASTMHLSANKSMPASGLNAVIPNTSQLTIFYNGSVCTYDGIPAEKVHEIMLIAAATAAAAKSSEMKKMGIQTPILSPVPSRPSSPHGATNNVASSQGLCFPAKKSSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSPTTKVADNIENNFCADNALDLVSLKQPKEEFQPTISAS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01920 227 Pfam Jas motif 162 186 IPR018467 -
Rops11g01920 227 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 53 194 IPR040390 -
Rops11g01920 227 Pfam tify domain 70 102 IPR010399 -
Rops11g01920 227 ProSiteProfiles Tify domain profile. 68 103 IPR010399 -
Rops11g01920 227 SMART tify_2 68 103 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01920 Rops-Chr11 31009311 31014278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01920 68 189 Tify Gene Family AT5G20900 52.033 5.75e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops11g01920 tify 3.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01920 K13464 - gmx:100306524 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05075 2 91064501 91068235 Rops11g01920 11 31009311 31014278 PCT