Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01912 ATGGAATCTACTATAGATGATGCTATTGCAGCTAAGGGTTGGATTGAGTGGCCTGGTTATGGAAGCTCTGTGTTGCGGACTCTTTATTTTGCAGAGTATGCTAATGAAGGTCCTGGTGCTGGAACTGCCAACAGGGTGCAGTGGCCTGGTTTTCATGTTCTTGGAGCTGAAGAGGCTGTTAAGTTCACTGTTGCTAGTTTCATTGCTGGAAATTCTTGGATTCCCTCAACTGGGGTCACTTTCATTTCAGGACTTAACTGA 261 0.4521 MESTIDDAIAAKGWIEWPGYGSSVLRTLYFAEYANEGPGAGTANRVQWPGFHVLGAEEAVKFTVASFIAGNSWIPSTGVTFISGLN* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01912 86 PANTHER PECTINESTERASE 1 76 - -
Rops11g01912 86 Pfam Pectinesterase 1 71 IPR000070 GO:0030599|GO:0042545
Rops11g01912 86 SUPERFAMILY Pectin lyase-like 1 84 IPR011050 -
Rops11g01912 86 Gene3D - 1 86 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01912 Rops-Chr11 30840174 30844828 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01912 1 85 Carbohydrate Esterase AT3G60730 55.814 3.92e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01912 K01051 - gmx:100795439 153.68