Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01896 ATGGTAGTGAAATGGGATATCAAAATGGCTAAGTTGCTTGTTGCTTCTGCTGGAAATGTCAAGTTTACTGGCTTTGGTTCGGCCAATCATGCTGTAGGAAAAGCTCTCTTCAAGTTGCAAGTAGAAGGTCGTCTTAAGAAGTGCATCTTTCCAATTCTTCGGTTTCTTTTGTCCCAAATTTCACTTTTCTCGTGGAAGCTATGCATTTTTCCTAAGATGCTACCATTACCTGATAAATGGATTTGCTGTGCTGGTTACCCAACAGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGATGGTGGGTTTGAAACTGCTAGAGAAGGAATTGTTATTGGGTTTATTGACACTGGCATAGATCCAACACACCCTGCATCTGCTATAACCAGAGGAATATTTCATTCATCTCAAAACTATGCTTCTCCCTTTGATGGCGCACTTTCAAAAGAAGTTGTTAAATTTGGTACAGTTTCCAGTATCTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCCAAGGGTACTTGGAGTTTTCTTGGCACTGATTTGGTCAAATTTCTAGGTGAGAATTTTGCAATGGTGTCTGGCACAAGTATGGCTGCACCACATGTAGTTGGTCTTGCTGCGTTAATTAGGCAAAAGTTCCCCAATCTCAGTCCTGCAGCCATTGGATCTGCACTTTCCACTACTTCCTCTTTACATGACCAGAGTGGTGGCCCAATAATGGCTTAG 738 0.4228 MVVKWDIKMAKLLVASAGNVKFTGFGSANHAVGKALFKLQVEGRLKKCIFPILRFLLSQISLFSWKLCIFPKMLPLPDKWICCAGYPTAEKLSRSSEVSNDGGFETAREGIVIGFIDTGIDPTHPASAITRGIFHSSQNYASPFDGALSKEVVKFGTVSSICGGLKANYGNAAPKGTWSFLGTDLVKFLGENFAMVSGTSMAAPHVVGLAALIRQKFPNLSPAAIGSALSTTSSLHDQSGGPIMA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01896 245 ProSitePatterns Serine proteases, subtilase family, serine active site. 198 208 IPR023828 -
Rops11g01896 245 Pfam Subtilase family 173 233 IPR000209 GO:0006508|GO:0008236
Rops11g01896 245 ProSiteProfiles Serine proteases, subtilase domain profile. 1 245 - -
Rops11g01896 245 SUPERFAMILY Subtilisin-like 185 236 IPR036852 GO:0004252|GO:0006508
Rops11g01896 245 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 188 243 IPR045051 -
Rops11g01896 245 Gene3D Peptidase S8/S53 domain 190 240 IPR036852 GO:0004252|GO:0006508
Rops11g01896 245 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 113 124 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01896 Rops-Chr11 30683096 30686725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01896 149 245 Subtilisin-like Serine Gene Family AT4G20430 45.038 1.48e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01896 - - cpap:110807399 148.673