Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01891 ATGGCGTCGTTAGAGAATGAGCCTTCTTCTCACTCTCCTCCTCCTCCTCCTCCTGCACATGTGCGTATGATCAAGTTTAGGCTCTATGAGACTCTATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACTTATTGGAGAGTGCTAAAGATTGACCGTCTAGATCCCTCCGAGCTAACTGTGCGTGAAGATTCCACTATGTATACAGAAAGTGAATGTTCTGATCTGTTGAGGCGTATACATGAGGGGAACAAGTCCACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGTATGGTTCATAAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAGAAGGCAAATTGGGGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGCGAGATGATTCCACTACAAAATTCTTCGGTTCATTCTAACATCACTGATTCTAAAAATGAAGACAGATACAAGAAGCTCCTATGCATGGTCGACCTTACGAAGGACTTCTTTTTCAGCTACTCATATGACATTATGCGTAGTCTGCAAAGGAACTTGTGTGATAATGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTTTGGAATGAGTTTTTGACTCGAGGAATTAGGAATCACCTCCACAATACTCTTTGGACAGTTGCACTAGTGTACGGCTTTTTTAAACAGGACACACTTACAATATCTGGGCGAGAGTTCATACTTACGCTTATTGCAAGACGGTCGCGTCATTATGCTGGCACTAGGTATTTAAGACGAGGTGTTAATGAGAAGGGCAGAGTAGCTAATGATGTTGAGACAGAACAAATTGTGTTTGAGGATGTTCCTGAAGGTCTCCCAGTCCAAATAAGCTCTGTTGTCCAGAACCGGGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGTCTGAATCTTAAGCCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCCACCAGACTTCACTTCGAAAATCTTGTCAAAAGATATGGGAATCCCATAATAATTTTGAATTTGATAAAGACACATGAGAAGAAGCCTCGTGAATCTATACTTCGTACAGAATTCGGTAATGCTATTGATTTCATTAACAAAGATTTACCAGAGGAGAATAGGCTTAGATTCCTTCACTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTTTTGCTACTTCTGGGCAAAGTGGCTGCATATGCCTTGACATTAACAGGTTTTTTCTACTGCCAAGTGACACCAACTTTTAGACCAGAAGACTGTATAAAATGGCCATCTACTGACTTTGCATATGGCAATGTTGATATGGGAGGCTTTCAACCTACAAGACATGTTGGTGTTGACAAACAGGATGCTAATAATTTAGAGAGGAAACCTAGTGGAGGAAACAACATTGTTAATGGAAACCATTCTGTCAAGCCGCCCATGTTCCAGAGGGGGGTGCTCAGGACCAATTGCATAGACTGCTTAGATCGCACTAATGTTGCACAATATGCATATGGGTTGGCTGCACTTGGCCACCAGCTTCATGCTCTGGGAATTATTGACCACCCAAAAATTGACCTTGACGATCCTCTAGGTGATGATTTGATGGGATTTTATGAGCGGATGGGTGACACACTTGCACACCAGTATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGACAGTGGCGAGCTGCAACAGAGTCTCAGGAGTTTTTTAGGACTCTTCAACGATATTACAGCAATGCATACATGGATGCTGAGAAGCAAAATGCTATTAACTTATTCCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTATATGGGAGTTGGGTTCAGATCAACATTGTGATGTAGGGAGACATGGGGATGATGATGCAAGGTCAACTGTCAAAAGATGTTTCTCAGATGGAAGCATTCTCCGTGACAGTTTCACACCTATGTCAGCCCAAAATCCCAAGCTGGAAAAATTCTCAAAGCTAGGATTGCTAGAACATTCTGAAGAAGGAAGCAAGGCTTTTTGTGAGTCATCACCTGAAATATCAACAGCTGAGAGTGACATGTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGACAGCTTTTTGGAGACATGCAAAGGGAGCGCTTCCTTGAAAGTGATCATATTTTCTATTCTGAGCGTGGGGAATCATCCAGCTGCTCTAACTTTGTTGACTTAGACTGGCTGTCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATGCGAGAGGTCATCAATTGCAAATTCTCCAATTGCTGGACTTTCTTCAGAAAATGTTGTTAATGGAGTTATTATGGGAGAAGATACAACTCCCTCCACTAGTGATTTGGACTCCAGCATTAAGGGAAGGGAGCGAACTGGGTCGGAATTATCAAACCGTAATGCACGGTCCAAAGTTCTAGAGGAATTTCCTGATACTTTTGTACACTGGGTGACTAATGGACAAACGCTCTGCCATTGA 2523 0.4245 MASLENEPSSHSPPPPPPAHVRMIKFRLYETLSNFYMIGRDKSRTYWRVLKIDRLDPSELTVREDSTMYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGMVHKIFGALLHAAYHKRRQIGAICGHTVYAVSKSEMIPLQNSSVHSNITDSKNEDRYKKLLCMVDLTKDFFFSYSYDIMRSLQRNLCDNETGHVLYETMFVWNEFLTRGIRNHLHNTLWTVALVYGFFKQDTLTISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVPEGLPVQISSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRTEFGNAIDFINKDLPEENRLRFLHWDLHKHFQSKATNVLLLLGKVAAYALTLTGFFYCQVTPTFRPEDCIKWPSTDFAYGNVDMGGFQPTRHVGVDKQDANNLERKPSGGNNIVNGNHSVKPPMFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHPKIDLDDPLGDDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATESQEFFRTLQRYYSNAYMDAEKQNAINLFLGHFQPQQGKPAIWELGSDQHCDVGRHGDDDARSTVKRCFSDGSILRDSFTPMSAQNPKLEKFSKLGLLEHSEEGSKAFCESSPEISTAESDMSFSRYTPSMPRRQLFGDMQRERFLESDHIFYSERGESSSCSNFVDLDWLSSSGNSCEEEPCERSSIANSPIAGLSSENVVNGVIMGEDTTPSTSDLDSSIKGRERTGSELSNRNARSKVLEEFPDTFVHWVTNGQTLCH* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01891 840 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 13 831 IPR043573 GO:0043813|GO:0046856
Rops11g01891 840 ProSiteProfiles Sac phosphatase domain profile. 163 560 IPR002013 GO:0016791
Rops11g01891 840 MobiDBLite consensus disorder prediction 799 815 - -
Rops11g01891 840 MobiDBLite consensus disorder prediction 787 815 - -
Rops11g01891 840 Pfam SacI homology domain 98 396 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01891 Rops-Chr11 30594468 30614953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01891 23 840 Acyl Lipid Metabolism Gene Families AT5G20840 61.743 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01891 K22913 - gmx:100786438 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01891 11 30594468 30614953 Rops10g01297 10 25556452 25575465 ECH
Rops11g01891 11 30594468 30614953 Rops11g01891 11 30594468 30614953 ECH
Rops2g05093 2 91307657 91320834 Rops11g01891 11 30594468 30614953 PCT