Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01888 ATGGCCAAAGGTGGAAAACTAACAAAGCTTAAGTCAGTGCTGAAGAAATGGAACTCCTTCAGCAACAAGCAGCATAGCCGCGCCACCATCAGCGCCGTCGAGAACGATGAGTCGTCGTCGCCATCTGCACCGGAGCTCCGCCCCGTGTTCGTTGGCAAGACATGGCGGCGTTACCTCGTGAGTTCCGATGTTGTCGGACATCCACTCTTCCGGGAACTGGTCGACAGGTCCGAGGAGAACAATGAATACGATGATGACACCGTCCACGTGGCATGTGAGGTTGTCTTGTTTGAGCACTTGCTCTGGATGCTTGAGAATGCTGATCCTCAACCTGAGTCACTGGATGAACTCGTTGAGTTCTATGCATACTAA 372 0.5242 MAKGGKLTKLKSVLKKWNSFSNKQHSRATISAVENDESSSPSAPELRPVFVGKTWRRYLVSSDVVGHPLFRELVDRSEENNEYDDDTVHVACEVVLFEHLLWMLENADPQPESLDELVEFYAY* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01888 123 MobiDBLite consensus disorder prediction 21 42 - -
Rops11g01888 123 MobiDBLite consensus disorder prediction 21 45 - -
Rops11g01888 123 PANTHER EXPRESSED PROTEIN 19 122 - -
Rops11g01888 123 Pfam Auxin responsive protein 15 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01888 Rops-Chr11 30554031 30554613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01888 6 106 Calmodulin-binding Proteins AT3G43120 27.273 1.12e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01888 - - qsu:112019930 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01888 11 30554031 30554613 Rops11g01888 11 30554031 30554613 ECH