Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01876 ATGCAACTCCATCTCGCACTCACACTCACTTCTCTCTTTCTCTTCCTTTTGTCCATTTTATCATGCGCCGCAGCAGCGCACGATGAGGCACAAGATCTGGTCCGTTCATCATGCGTCCACGCAAGGTACCCGAGGCTCTGTCTCCGAACCCTCTCCAACTATGCTGGGCCCGCCAACAGCCCATTGGACGTGGCTCGGGCCTCGCTCAGGGTAGGCCTGGCCCACGCCCGCCGGGCCTCCAAGTATCTACGGGCTTCCAAAGGCGGCAGTGGGAAGAACAAGCGGGCACTGAAGGACTGCGTGGAACTGGTTGCTGATTCGGTGGATCAACTGCGGAGGAGCTTAGAGGAGCTGCAACACCTTCGGCCGGAGACTTTCCAGTGGCAGATGAGCAACGCCATGACGTGGGTCAGCGCCGCCCTCACCGACGGCGACACGTGCCTCGACGGGAATGTGAGGCCTGACGTGAAGCGTAGGGTCACGGACATGGCGAGGGTAACCAGTAATGCTCTGTATATGATCAATCGTTTAGGACAAGGTGGGACCGGGAAGCCTAAGCATTCAAGTTCCAAGAATTGA 579 0.5803 MQLHLALTLTSLFLFLLSILSCAAAAHDEAQDLVRSSCVHARYPRLCLRTLSNYAGPANSPLDVARASLRVGLAHARRASKYLRASKGGSGKNKRALKDCVELVADSVDQLRRSLEELQHLRPETFQWQMSNAMTWVSAALTDGDTCLDGNVRPDVKRRVTDMARVTSNALYMINRLGQGGTGKPKHSSSKN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01876 192 Coils Coil 101 121 - -
Rops11g01876 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 172 - -
Rops11g01876 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 178 IPR035513 -
Rops11g01876 192 NCBIfam pectinesterase inhibitor domain 11 177 IPR006501 GO:0004857
Rops11g01876 192 CDD PMEI-like_3 36 177 - -
Rops11g01876 192 FunFam Pectinesterase inhibitor 3 29 178 - -
Rops11g01876 192 Pfam Plant invertase/pectin methylesterase inhibitor 32 172 IPR006501 GO:0004857
Rops11g01876 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 177 IPR035513 -
Rops11g01876 192 SMART PMEI_2 29 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01876 Rops-Chr11 30292773 30293351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01876 33 177 Carbohydrate Esterase AT3G14310 30.625 6.68e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01876 - - gmx:100816686 254.988