Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops11g01871 | ATGAAGGCTCCTTCCAATGGTTACTTGCCTAATTCTGGCGAAGGTGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCGTTGGTTTCATTACCACCTGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCATCTATGCAAAAGGAGGCCGACATCATACCCAGTTACCCTAACCTTCCCTCCAAGTTGATTTGCATGCTTCACAATGTTGTCCTGCATGCTGATCCTGAAACTGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAAGAAGCAATGCTGGCATCAGACATGGGTCTCAAACAAAACCAACAACCTACTGAATTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCACCTCTGGATTTTTCATTGCAACCTCCAGCTCAGGAGATTGTTGCCAAAGATTTACATGACAGCACATGGACATTTAGACATATTTATCGTGGACAACCAAAGAGACATCTATTGACTAGTGGTTGGAGTGTCTTTGTTAGCACAAAAAGGCTGTTTGCTGGAGATTCTGTTCTTGTTATCAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAAGCGAGCAAATAGACAGCAGCCAGCACTATCTTCGTCAGTAATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAACAGCCCATTTACTATATTTTATAATCCAAGGACCAGCCCCTCTGAATTTGTAATTCCATTGGCCAAGTATAATAAATCCATGTACACTCAAGTTTCTCTTGGAATGAGATTCAGAATGATGTTTGAGACTGAGGAGTCAGGAGTACGCAGATATATGGGTACTATCACTGGGATCAGTGACTTGGATCCTGTCAGATGGAAAAATTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGCCCAAGCAGAGTTTCAATTTGGGATATTGAACCAGTGGTGACTCCTTTCTACATTTGTCCACCTCCATTTTTTAGGCCCAAGTTCCCCAAGCAACCGGGAATGCCAGAAGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCGTGGCTTGGAGATGACCTTGGCATGAAGGATGCCTCAAATTCAATCTTTCCTGGTTTGAGTTTAGCTCAATGGATGAGCATGCAGCAGAATAATCAATTCTCTGCTGCACAATCAGGGCTTTTACATCCTTCCATGCTTTCATCTAATACACTGCATGGTAACTTAAACACTGATGATCCATCCAAGTTATTGAGCTTTCAACCCCCTGTCCTCTCTGCACCAAATCTTCAATTTAACAAACCTAACTTACCAAACCAAGTCAACCAATTGCAACAGTCCCCAACATCATGGCCTCAGCAGCAGCAGCAGCAGCAGCAACAGAAGCTGCAGTCATTGTTGCAATCACCATTAAACCAACTCCAGCAGCAGCAGCAGCATAGGCAACAACAGCTGCCTGGACCACAAAACCTGCCACAGCCACAACAACAACCACCCCAACTACCTCAACAAAGAGCACAGCAGCCACAACAACAGCAACAGTTGTGTCAAAATACCATTATGAATAATGGGGCAGTTGCTTCTAGCCATATTCCAAATCAGTGTGTACAGCAACCAGTGACCTATTCTCAGCTTCAGCAACACCAATTACACTCGGGAAATATCCCACCCCAACAAAGTTTCCAATCAGTTGGTAAGAACACATTGCTAATGACATCCTTGCCCCAAGACACACAATTTCAGCTACAGACAGACCAGCAAGCTAGTCTCTTACAGAGGCAGCAGCAGCAACAGCCACAGTTGCAACAATCTCCATTGCAGTTATTGCAACAAAGTCTGTCACAAAGGGCAACACAGCAACCACAAGTGACTCAAATGTCACCTCAAAACACCTCAGAGCAACAACCACAATTGCAGCTGCTGCAGAAGTTGCAGCAGCAACAGCAACAGCAACAGCAGCCGCAGCAACAGCAACTCCTTTCCACATCTAGCTCGAATCTCCAGGCTCAGCTCCTGCAACAACAAAATACTCACCAACAAAACCAGCAACTACCACAGCTGCCTCTGTCACAGCAACATCAGCCTCAACAGCTAGGCAACAATGCATTCTCAATGGAGAAGCTTCTCAACAACAACTTCTCTTCAGCTCTGATGCAATCACAGCAGCTTCCTGTGAACCAATCCCAGAATACACAGAAATCACTAACTAATACTAGAGCTCCCTCTACTCTTACAGATGGAGATGCCCCATCATGCTCAACTTCACCATCTACTAATAACTTCCAGATATCTCCTCCGAACCTCCTGAAAAGAAATCAACAAGTAGCAGTCACATCATTGGGGCCTTCAGTAGTTGAATCCACCAATAATCTGATGCAGGAGCTTCAGACTAAGTCTGACATGCAGATCAAACATGAATTGCCAAGTGTAAAAGGACCTGACAAGCTAAAGTATAAAGGGACAATTACTGATCAGATGGAAACTTCTTCTGGAACATCTTACTGTATTGATCTTGGTAGTATTCACCAGAACTTCCAACTTCCCAACTTCTGTATGGATGGGGATGTCCAATCACACTCTAGAAATAATCTACCATTTGCCTCTAATCTTGATGGATTAACTCCTAGAAATAATCTACCATTTGCCTCTAATCTTGATGGATTAACTCCTGATACTTTGCTCTCAAGAGGGTATGATGATCAAAAAGATCTTCAAAACTTGCTGTCTACTTATGGTGGTGCTCCAAGAGACATTGAAACTGAGCTGTCCACTGCTGCCATTAGTTCACAGTCATTTGGGGTGCCAAACATGCCTTTTAAACCGGGATGCTCAAATGATATAGCCATCAATGATACTGGGGTTTTGAATAATGGCTTGTGGGCTAATCAAACTCAACGAATGCGAACATATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATTGATGTCACCCGTTACAAGGGATATGAAGAACTCCGGCATGATTTGGCTCGTATGTTTGGGATTGAAGGGCAACTAGAAGATCCTCAAAGGACTGAGTGGAAACTAGTATATGTGGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCATGGGAAGAATTTGTGAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAACAACTGAGCTTGGATGGAGATTTGGGTAATGTTCCAATTCCCAATCAAGCTTGCAGTGGGACAGAAAGTGGCAATGCATGGAGGGCACAGTATGATGATAACTCTGCAGCCTCATTCAATCGATAA | 3411 | 0.4359 | MKAPSNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADIIPSYPNLPSKLICMLHNVVLHADPETDEVYAQMTLQPVNKYDKEAMLASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSLQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTSGWSVFVSTKRLFAGDSVLVIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRTSPSEFVIPLAKYNKSMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESDIENAFKRAMPWLGDDLGMKDASNSIFPGLSLAQWMSMQQNNQFSAAQSGLLHPSMLSSNTLHGNLNTDDPSKLLSFQPPVLSAPNLQFNKPNLPNQVNQLQQSPTSWPQQQQQQQQQKLQSLLQSPLNQLQQQQQHRQQQLPGPQNLPQPQQQPPQLPQQRAQQPQQQQQLCQNTIMNNGAVASSHIPNQCVQQPVTYSQLQQHQLHSGNIPPQQSFQSVGKNTLLMTSLPQDTQFQLQTDQQASLLQRQQQQQPQLQQSPLQLLQQSLSQRATQQPQVTQMSPQNTSEQQPQLQLLQKLQQQQQQQQQPQQQQLLSTSSSNLQAQLLQQQNTHQQNQQLPQLPLSQQHQPQQLGNNAFSMEKLLNNNFSSALMQSQQLPVNQSQNTQKSLTNTRAPSTLTDGDAPSCSTSPSTNNFQISPPNLLKRNQQVAVTSLGPSVVESTNNLMQELQTKSDMQIKHELPSVKGPDKLKYKGTITDQMETSSGTSYCIDLGSIHQNFQLPNFCMDGDVQSHSRNNLPFASNLDGLTPRNNLPFASNLDGLTPDTLLSRGYDDQKDLQNLLSTYGGAPRDIETELSTAAISSQSFGVPNMPFKPGCSNDIAINDTGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYEELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQLSLDGDLGNVPIPNQACSGTESGNAWRAQYDDNSAASFNR* | 1137 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops11g01871 | 1136 | MobiDBLite | consensus disorder prediction | 714 | 736 | - | - | |
| Rops11g01871 | 1136 | FunFam | Auxin response factor | 289 | 361 | - | - | |
| Rops11g01871 | 1136 | ProSiteProfiles | PB1 domain profile. | 1009 | 1102 | IPR000270 | GO:0005515 | |
| Rops11g01871 | 1136 | MobiDBLite | consensus disorder prediction | 469 | 531 | - | - | |
| Rops11g01871 | 1136 | MobiDBLite | consensus disorder prediction | 762 | 806 | - | - | |
| Rops11g01871 | 1136 | SUPERFAMILY | CAD & PB1 domains | 1023 | 1087 | - | - | |
| Rops11g01871 | 1136 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 16 | 1098 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
| Rops11g01871 | 1136 | Pfam | Auxin response factor | 252 | 334 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
| Rops11g01871 | 1136 | SMART | B3_2 | 126 | 228 | IPR003340 | GO:0003677 | |
| Rops11g01871 | 1136 | MobiDBLite | consensus disorder prediction | 469 | 555 | - | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops11g01871 | K14486 | - | gmx:100804628 | 904.82 |
Showing 1 to 1 of 1 entries