Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01863 ATGTCGAGTTCATCTGAGTACTCGGAGATTTCCGGTCAGAAACCGGCTAAGTCGCCGGAAAAGTCGACTTTCTCTCAGACTTGTAGTCTGTTGAGTCAATATATCAAGGAAAAGGGTAGCTTTGGAGATCTTACCCTCGGGATGACAGGCAACACCGACCCAAGTGGGTCACCTGAGACTTCTTGTCAGTCTGCAACAACCATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGCTCCCTTTCGTCCCCATTTACCCGCAGAAGAGATTCCAACCTTGATCAATTCCAATGCAATTAAGGCTGTGAGCAAGGGGCCTAAGGCTTCACAATTGACAATCTTCTATGCTGGTCAAGTTATTGTCTTTGATGATTTTCCTGCTGATAAAGCTAATGAGCTCATGTCCTTTGCTAGCAAAGGCATCTCACAAAACCAGAACAACTCTGTTTACACTTACACACACAGCCAGCCTTCATTTCCTCCTAATCTGGTCAGAACTTCTGCTGATTCAAGTACTCCAATTGTTCCCAGTGTGAACATCATCCCTAGTTCTGGCACCAACTCCATTCATGAACACCCTCAAGTGTCATCAAGACCTATTGTTTGTGATCTGCCAATTGCTAGGAAGGCTTCACTTCATCGATTCCTTGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAATTACAAATCCGATGGGGTCTGCTAATAAGCCAGCTGAATCCATGCCATGGCTTGGGTTGGGAGCTAAATCATCACAAATCTGA 816 0.4485 MSSSSEYSEISGQKPAKSPEKSTFSQTCSLLSQYIKEKGSFGDLTLGMTGNTDPSGSPETSCQSATTMNLFPTKENNVTPKNLTAMDLLSPQAPFRPHLPAEEIPTLINSNAIKAVSKGPKASQLTIFYAGQVIVFDDFPADKANELMSFASKGISQNQNNSVYTYTHSQPSFPPNLVRTSADSSTPIVPSVNIIPSSGTNSIHEHPQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYQITNPMGSANKPAESMPWLGLGAKSSQI* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01863 271 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 254 IPR040390 -
Rops11g01863 271 Pfam tify domain 120 152 IPR010399 -
Rops11g01863 271 ProSiteProfiles Tify domain profile. 118 153 IPR010399 -
Rops11g01863 271 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g01863 271 Pfam Jas motif 219 244 IPR018467 -
Rops11g01863 271 SMART tify_2 118 153 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01863 Rops-Chr11 30019622 30022176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01863 1 267 Tify Gene Family AT1G19180 40.714 1.41e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops11g01863 tify 4.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01863 K13464 - gmx:100801449 409.068