Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01861 ATGGCTTTATCCATTTCCTCCACTGCACTGTCAAGTTTTCCAAACAGAGAATTACCTCAAAAGGTTTTCCCTGAAAGAACAGCCACATGGTTGACTAGAAGAACTGTTACAAATGCAAAAAAAGGAGTGTCAGATGTGTGTGAGCCACTTCCTCCAGATAGGCCATTGTGGTTCCCTGGTAGTTCACCTCCTCTGTGGCTTGATGGAAGTCTTCCTGGTGATTTCGGTTTTGACCCTCTTGGATTAGGGTCGGATCCAGAGTTGCTTAAATGGTTTGCTCAGGCTGAGCTAATGCATGCTAGATGGGCAATGCTAGGAGTGTCTGGAATTCTCATTCCAGAGTTGCTTGTAAAGATGGGTTTTATTGATAACTTCTCTTGGTATGATGCTGGTGATCAAGAATACTTTGCAGATCCCACAACCTTGTTCATTGTACAATTAGCCTTGATGGGCTGGGTGGAGGGTAGAAGATGGGCTGATATAATTAACCCAGGAAGTGTTGACATTGAGCCCAAGTTCCCAAATAGGCCCAACCCAAAGCCTGATGTTGGTTACCCAGGTGGGTTGTGGTTTGACCCCATGATGTGGGGAAGAGGGTCACCTGAACCAGTGATGGTGTTAAGAACCAAGGAGATCAAGAATGGTAGACTTGCAATGCTGGCTTTTGTTGGTTTCTGGTTCCAAGCTATTTATACTGGGGAAGGTCCCCTTGATAATTTGATGGCACATATTGCAGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACTTCGCGGTAG 780 0.4551 MALSISSTALSSFPNRELPQKVFPERTATWLTRRTVTNAKKGVSDVCEPLPPDRPLWFPGSSPPLWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLVKMGFIDNFSWYDAGDQEYFADPTTLFIVQLALMGWVEGRRWADIINPGSVDIEPKFPNRPNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPLDNLMAHIADPGHCNIFSAFTSR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01861 259 Gene3D Chlorophyll a/b binding protein domain 64 249 - -
Rops11g01861 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 257 IPR001344 GO:0009765|GO:0016020
Rops11g01861 259 FunFam Chlorophyll a-b binding protein, chloroplastic 64 249 - -
Rops11g01861 259 Pfam Chlorophyll A-B binding protein 64 229 IPR022796 -
Rops11g01861 259 SUPERFAMILY Chlorophyll a-b binding protein 53 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01861 Rops-Chr11 29995881 29997872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01861 52 259 Chloroplast and Mitochondria Gene Families AT3G61470 69.712 1.12e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01861 K08908 - gmx:100800374 475.322