Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01825 ATGTCAATGAATTCGGTTTTCCTACCAAATTCAAATAGATGGTCTCTAATAGCTGGAAGGCTTCCAGGCAGAACTGACCAAGAGATAAAGAATTATTGGAACACCAATTTAGGTAAAAAAGTGAAAGATGGTAACTCCAACACTTCATCTGCAAACCCCAATGAAAAGAACCATCGGAAAACAAAGCCTCAATCAACCTCCAAGGTTGCTGCTCCATCACCCTCATCATCTCCTCCTGATATGTCTAAGCTAGATTCCAATTTGATCCATGAAAAGGAATCCAAGTTGGTGTTCCCAGATCCACAACCTCACTCATCAACCCAAGATCAGAGCAATTTGGCAGAACTAAAAGCAGAAGAAGCAGTACCGTTTTGTGTGGAAGATACAGCCAATAATTTAAACAGTGACAAAATGGAGACAAGTGTGTACGAGGATGGAGTTTTGTGGTTTCCCAGTGATGAAAAGGAACCCTCATTGGATATGCTCTGGGACTTTGACATTGGCGAAATTTTATTAGATGATCTTCTGAACTTCGATGTCTCCGAGGTGTGTGATCTCAGTTCCAACAAAGACGAGGATCTATTGCCTTTTTGGGACCAGCCTCTGGTGTCTTCACTTGAAATTCTCGAAACAGACAGGCACGTTAGCGATGAAACAAATGAGGCAAGTAACAATTTTTAA 681 0.4126 MSMNSVFLPNSNRWSLIAGRLPGRTDQEIKNYWNTNLGKKVKDGNSNTSSANPNEKNHRKTKPQSTSKVAAPSPSSSPPDMSKLDSNLIHEKESKLVFPDPQPHSSTQDQSNLAELKAEEAVPFCVEDTANNLNSDKMETSVYEDGVLWFPSDEKEPSLDMLWDFDIGEILLDDLLNFDVSEVCDLSSNKDEDLLPFWDQPLVSSLEILETDRHVSDETNEASNNF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01825 226 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 12 126 - -
Rops11g01825 226 MobiDBLite consensus disorder prediction 34 84 - -
Rops11g01825 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 41 IPR017930 -
Rops11g01825 226 CDD SANT 12 37 IPR001005 -
Rops11g01825 226 Pfam Myb-like DNA-binding domain 12 37 IPR001005 -
Rops11g01825 226 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Rops11g01825 226 MobiDBLite consensus disorder prediction 64 83 - -
Rops11g01825 226 SUPERFAMILY Homeodomain-like 11 45 IPR009057 -
Rops11g01825 226 Gene3D - 5 69 - -
Rops11g01825 226 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01825 Rops-Chr11 29379054 29384245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01825 11 89 MYB Transcription Factor Family AT1G66370 44.304 5.94e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops11g01825 Myb_DNA-binding 9.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01825 K09422 - gmx:100781908 150.984