Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01812 ATGCTTACATGCATAACACGTCCGAAGAAACTCGGGGACGACTCACTGAGTCACCCGGGCGATTCAGACTCGAGCAACAACAACGCCGCAGCAAAACACCACCAAGGTATAAAGTCCATCACTTATCAGCTAAAGGACATGGCGTTGAAGGCTTCGGGTGCGTACAAGCACTGCACCCCGTGCGCGCCTCCGAGTCAACTCGGTGCCAACGCGGCCGAGTCAGACACGAACTCAGAGCGGTTCCATCGTTCGTTTCATAGGACGAGAACATGGGGGAAGGAGATGGAGGCGAGGCTTAAGGGAATCTCGAGCGGTGAAGCGACGCCGAGCTCCTCCTCCTCCGCCGGAGGCAGTGGCCGGAGAGTGGTGGTTCTTTTGGAGGAGGATGAGCCTAGGGAGTGGGTGGCGCAGGTGGAACCTGGCGTTTTGATTACATTTGTGTCGCTTCCACGTGGCGGGAACGATCTCAAGCGGATACGCTTCAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGCTCTAAGCGTGAATCAATAGAGGACAGCCCTGTCACACCTCCACTAACCAGGGAACAGTTACCTCGTAATTTGTACCGTCCAACTGGGATGGGAATGGGGTATTCATCCTCAGATTCTTTTGATCATCAATCAATGCAATCACGGCATTACAATGATTCAAATGGGATGAACTCAACCCCAAAGGTGTCTACCATTAGTGCTGCCAAGACTGATATATCATCAATGGATGCTTCTATAAGAAGTAGCTCATCTAGAGAAGCTGATCGCTCTGAGGATCTATCAATCAGCAATGCCAGTGACTTGGATACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTGCCAGGTGGCAAAAGGGAACTCAGAAGAGTCAGATTCAGTCGAGAAAAATTTGGAGAGATGCATGCTAGACTATGGTGGGGAGAGAACCGCGCCAGAATACACGAACAATACTTGTGA 1101 0.5059 MLTCITRPKKLGDDSLSHPGDSDSSNNNAAAKHHQGIKSITYQLKDMALKASGAYKHCTPCAPPSQLGANAAESDTNSERFHRSFHRTRTWGKEMEARLKGISSGEATPSSSSSAGGSGRRVVVLLEEDEPREWVAQVEPGVLITFVSLPRGGNDLKRIRFSREIFNKWQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEDSPVTPPLTREQLPRNLYRPTGMGMGYSSSDSFDHQSMQSRHYNDSNGMNSTPKVSTISAAKTDISSMDASIRSSSSREADRSEDLSISNASDLDTEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWGENRARIHEQYL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01812 366 MobiDBLite consensus disorder prediction 238 269 - -
Rops11g01812 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Rops11g01812 366 Pfam Transcription factor regulating root and shoot growth via Pin3 311 365 IPR013591 -
Rops11g01812 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Rops11g01812 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Rops11g01812 366 MobiDBLite consensus disorder prediction 1 34 - -
Rops11g01812 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Rops11g01812 366 MobiDBLite consensus disorder prediction 18 34 - -
Rops11g01812 366 MobiDBLite consensus disorder prediction 195 269 - -
Rops11g01812 366 Pfam Transcription factor BRX N-terminal domain 30 61 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01812 Rops-Chr11 29143017 29149861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01812 1 366 Major Intrinsic Protein MIP AT1G31880 43.041 1.06e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01812 - - cit:102610534 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01812 11 29143017 29149861 Rops11g01812 11 29143017 29149861 ECH
Rops2g05157 2 92260101 92264933 Rops11g01812 11 29143017 29149861 PCT