Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01805 ATGAAGAAAGGATGCTTAGGTCCCAGTCTTAAACTCACAGTTCCTGCATCGGATTCTGATCATGCTTCTTTTGCCAAGTATCTGACTGAAAGTGGGACGTTCAAGGATGGGAATTTACTTGTCAATAGATATGGAGTTCGAGTTGTCTCTCAGAGTGAAGTGGAAGCTCAACCCCCAATCAGGCCACTAGACAACCAGTTAAGTTTGGCAGACATTGATACAATCAAAGTGATTGGTAAAGGAAATGGAGGGATAGTGCAATTGGTGCAACACAAATGGACTGATCAGTTTTTTGCATTAAAGCAAATTCAAATGAAAATTGAGGAGTCTACATGCAGGCAGATAGCACAGGAGCTAAAAATCAATCAATCAGCACAATGTCCTTATGTTGTTATGTGCTACCAGTCATTCTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGAGGATCTTCTGAGCAAAGTTAAAACAATTCCTGAGCCATATCTTGCTGCCATTTGTAAGCAGGTACTGAAGGGTTTAATGTATCTTCACCAAGAAAAACATATTATCCACAGGGACTTGAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGGTAAAGATTACTGACTTTGGTGTGAGTGCAATCATGGATACTACATCTGGTCAAGCAAATACTTTTATTGGCACATGCAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGCAAGGCTACAACTACAGAAGTGATATATGGAGCTTGGGACTGGTGTTGCTCAAGTGTGCTACAGGGCGGTTTCCATATACACCACCAGATCAAAATGAAGGGTGGGAAAATATGTTCCAGCTTATTGAAGCCATTGTTGAAAAACCTCCACCTCGTGCTCCATCTGATGAATTTTCTCCTGAATTTTGCTCATTTATCTCAAAATGTTTACAGAAAAATCCAAGGGATAGACCATCGGCTCCTAACCTCATGAGGCATCCTTTTATCAACCTGTATGAGGACTTGGATGTGGATCTTTCAGCTTATTTCTCCAATGCGGGGTCTACACTTGCAACCATATAA 1077 0.4076 MKKGCLGPSLKLTVPASDSDHASFAKYLTESGTFKDGNLLVNRYGVRVVSQSEVEAQPPIRPLDNQLSLADIDTIKVIGKGNGGIVQLVQHKWTDQFFALKQIQMKIEESTCRQIAQELKINQSAQCPYVVMCYQSFYDNGVISIILEYMDGGSLEDLLSKVKTIPEPYLAAICKQVLKGLMYLHQEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMDTTSGQANTFIGTCNYMSPERINGSQQGYNYRSDIWSLGLVLLKCATGRFPYTPPDQNEGWENMFQLIEAIVEKPPPRAPSDEFSPEFCSFISKCLQKNPRDRPSAPNLMRHPFINLYEDLDVDLSAYFSNAGSTLATI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01805 358 FunFam Mitogen-activated protein kinase kinase 6 153 353 - -
Rops11g01805 358 SMART serkin_6 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01805 358 SUPERFAMILY Protein kinase-like (PK-like) 69 339 IPR011009 -
Rops11g01805 358 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Rops11g01805 358 Gene3D Phosphorylase Kinase; domain 1 47 151 - -
Rops11g01805 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 14 336 - -
Rops11g01805 358 FunFam Mitogen-activated protein kinase kinase 6 42 151 - -
Rops11g01805 358 CDD PKc_MAPKK_plant_like 70 338 - -
Rops11g01805 358 Pfam Protein kinase domain 74 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01805 358 ProSiteProfiles Protein kinase domain profile. 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01805 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Rops11g01805 358 Gene3D Transferase(Phosphotransferase) domain 1 152 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01805 Rops-Chr11 29024003 29028319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01805 29 355 MAP Kinase Kinase Gene Family AT4G26070 67.584 1.68e-168 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops11g01805 Pkinase 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01805 K20603 - gmx:547701 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01805 11 29024003 29028319 Rops11g01805 11 29024003 29028319 ECH
Rops2g05170 2 92436773 92440690 Rops11g01805 11 29024003 29028319 PCT