Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01804 ATGGAGGAAATAACTTTGACGGTTTCAGTACCATTTACAGTTGGGAATTTAATCCAAAAGGAATCAGCAGTGACAACCCACATGGAGATAACTGGTCTAAAGCTCATGGCAAATACAGCAGCTGCTTTAATATTAAATCCTGCAATTGAGTGTTGTCAATCCTTCTCTGTTGGAAGTGAAAACAACACAAATATTAGTCCACAACACCAAATTACAGTATCTAAAGAGGTAAAGGAGAATCAGGTTGGAGCTGACCTTGTCTCAGAAATGGTCACTGAAGGTGACCGTAATGGCCAGGCAAGAAATGAAGATGAATTCATGTTAGCTAAGGATTTTCAGTGTATACATAATCCAATCTCTCAATCTGCTGTTAGTGACAATAGCAGTCCTTGTATGGAGGAGTCTGCTATTTTGAGGACTAATTGTTATGAAATAAATTCACCAAATACCATCAAGGTTGATGATAATAACCATGTTAAGTCCAGTTTGACCGAGCCACATGCAGATGGAAGTGGATCAGGTGGGTCTGATCCAAAACCATTTGCTACACTTAATGATATGCCAGAAAAGCAAGCATGCAAAACAAGCTGCCAGAATGCCTTGGAATTGAGTGGCACTCCTCTTTGGGGTTTCTCATCAGTTTGTGGAATGAGACAGGAGATGGAAGATACTGTAGCTGTTAAGCCTCAACTTTTTCAAGTCCCTTCACAGATGCTAATGGATGACCATGTGAATGAAAACACAAAATACTCACCAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGCAGCCAGGTTGCCAATTACTGTCGGGAACATCTTCATTCAGTGTTGATTGAGGAGATAGAAGCTGCAGAATCAAGTTTGGCTGAAAATAATGGGAGAGACAACTGGCAGGACCAATGGAAGAAAGCATTATCCAGTTGTTTCCATAAAGTAGATGCTGAGGTTGGAGGAGTTAGTGCAGGTAATGATGAAAGGAACAGTGATGATGTATCTGAGTCAAATATGGAAGAAGCTCTTGTTCCTGAAGCTGTTGGCTCCACTGCACTGGTTTCCATTTTGACTCAAACCCACATAATAGTTGCAAATTGTGGTGATTCAAGAGCAGTCTTGTGTCGTGGAAAAGAAGCACTGCCATTATCTACTGACCACAAACCAAATAGAGAGGATGAGTGGGAAAGGATAGAAGCTGCAGGAGGAAGGGTCATACAATGGAATGGGTACCGAGTTCTGGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGATAGATATTTGAAACCATGGATAATTCCAGAGCCAGAAGTCAAGTTTGTTCTTCGAGAGAAAAACGATGAGTGCCTTATTCTAGCAAGTGATGGTTTATGGGATGTGATGACAAATGAAGAAGCCTGTGACATTGCACGAAAGCGGATCCTTCTTTGGCATAAGAAGAATGGCAACAACATATCAACAGAACAAGTCCATGATGTTGATCCTGCAGCTCAGTCTGCTGCGGATTATCTAAGTAAACTTGCCATTCAAAGGGGAAGCAAAGATAATATCTCTGTTATTGTCGTAGACTTGAAGGCTCCAAGACAATTTAAGAGCAAAGCATAA 1602 0.4145 MEEITLTVSVPFTVGNLIQKESAVTTHMEITGLKLMANTAAALILNPAIECCQSFSVGSENNTNISPQHQITVSKEVKENQVGADLVSEMVTEGDRNGQARNEDEFMLAKDFQCIHNPISQSAVSDNSSPCMEESAILRTNCYEINSPNTIKVDDNNHVKSSLTEPHADGSGSGGSDPKPFATLNDMPEKQACKTSCQNALELSGTPLWGFSSVCGMRQEMEDTVAVKPQLFQVPSQMLMDDHVNENTKYSPAHFFGVYDGHGGSQVANYCREHLHSVLIEEIEAAESSLAENNGRDNWQDQWKKALSSCFHKVDAEVGGVSAGNDERNSDDVSESNMEEALVPEAVGSTALVSILTQTHIIVANCGDSRAVLCRGKEALPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEVKFVLREKNDECLILASDGLWDVMTNEEACDIARKRILLWHKKNGNNISTEQVHDVDPAAQSAADYLSKLAIQRGSKDNISVIVVDLKAPRQFKSKA* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01804 533 PANTHER PROTEIN PHOSPHATASE 169 523 IPR015655 GO:0004722|GO:0006470
Rops11g01804 533 MobiDBLite consensus disorder prediction 151 185 - -
Rops11g01804 533 MobiDBLite consensus disorder prediction 151 169 - -
Rops11g01804 533 ProSitePatterns PPM-type phosphatase domain signature. 255 263 IPR000222 GO:0043169
Rops11g01804 533 FunFam Protein phosphatase 2C 16 196 533 - -
Rops11g01804 533 ProSiteProfiles PPM-type phosphatase domain profile. 208 523 IPR001932 -
Rops11g01804 533 SUPERFAMILY PP2C-like 207 525 IPR036457 -
Rops11g01804 533 Gene3D - 196 533 IPR036457 -
Rops11g01804 533 CDD PP2Cc 210 523 IPR001932 -
Rops11g01804 533 Pfam Protein phosphatase 2C 211 516 IPR001932 -
Rops11g01804 533 SMART PP2C_4 198 521 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01804 Rops-Chr11 29020935 29023210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01804 189 532 PP2C-type Phosphatase Gene Family AT4G26080 57.143 1.48e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01804 K14497 - gmx:100812974 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05171 2 92441359 92444862 Rops11g01804 11 29020935 29023210 PCT