Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01800 ATGGAGAAGAATCACAAGGTGGAGGAGGAGGGAGAGGAGGTGCATGTTGGGAAGGAGGGTGATGAGGTTGGTGAAGAGGAGGAAGAGGATCAAGGTACGGTTGGTTCAAGCTTGACCTTGGAAAGGGTAGCTGCAGCCAAAAAATTCATTGAAAACCATTACAGGGCTCAGACGAAACACATCCAAGAACGCAAGGAGAGGCGTTATGTGCTACAAAAGAAGTTGGAATCCTCCCATGTACCAGAAGAGGAACAGATCAATCTGCTAAAGGATTTAGAGCGCACGGAGACTGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGTAGGGGAGCCTTTGGAGAGGTAAGACTCTGTCGGGAGAAGAAAACAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGAAACCTACTTGCAGAAGTTGCCAGTGACTGCATTGTGAAACTGCTTTTCTCTTTTCAAGATGCTGAACACTTATATCTTATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCCCAAAGTGTTTTGGCCATAGAATCTATTCATAAACACAACTACATTCATCGGGATATAAAACCTGACAACCTTCTATTGGACAAATATGGTCATATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAATCTATCATCTATAAATGAAAATGAAATATTGGATGATGAGAGCTTGAATGATACCATGGACGTTGATGGAGCCTTCCCAAATAACAGAAATGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATAAACAGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGACTATATCGCTCCAGAAGTGTTACTGAAAAAGGGTTATGGTGTGGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCCGATGATCCTGTATCAACATGCAGAAAGATTGTGCACTGGAAGAATCACTTAAAATTTCCAGAGGAGGCAAGATTGACACCTGAAGCAAAGGATCTAATATGCAGATTGCTTTGTGGTGTTCCACATAGGCTTGGTACCAGAGGAGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCCCATGGAACAAGCTCTATGAAATGGAGGCAGCATTCAAACCACAAGTCAATGATGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAATCCAACCAGATCTGGATCCGGACCCATCAGAAAGATGCTCTTAACTCCTCAAGATATCAGTTTTGTTGGCTATACATATAAGAATTTTGCTGCTGTCAAGGGGATTCGTCGTTCTGCTGGAGGACATGATACAGATAAGGGGAGCATACCACCACGGTCATCAGTTGACTCCACACACAGTGATTCTGCAATAAACTATTCCAACTGA 1578 0.4183 MEKNHKVEEEGEEVHVGKEGDEVGEEEEEDQGTVGSSLTLERVAAAKKFIENHYRAQTKHIQERKERRYVLQKKLESSHVPEEEQINLLKDLERTETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASDCIVKLLFSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKYGHMKLSDFGLCKPLDCSNLSSINENEILDDESLNDTMDVDGAFPNNRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCGVPHRLGTRGADEIKAHPWFKDVPWNKLYEMEAAFKPQVNDELDTQNFMKFDEVEQPNPTRSGSGPIRKMLLTPQDISFVGYTYKNFAAVKGIRRSAGGHDTDKGSIPPRSSVDSTHSDSAINYSN* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01800 525 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 493 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops11g01800 525 ProSiteProfiles Protein kinase domain profile. 112 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01800 525 FunFam Non-specific serine/threonine protein kinase 73 195 - -
Rops11g01800 525 MobiDBLite consensus disorder prediction 1 38 - -
Rops11g01800 525 FunFam Non-specific serine/threonine protein kinase 318 437 - -
Rops11g01800 525 MobiDBLite consensus disorder prediction 1 21 - -
Rops11g01800 525 SMART serkin_6 112 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01800 525 MobiDBLite consensus disorder prediction 507 525 - -
Rops11g01800 525 FunFam Non-specific serine/threonine protein kinase 196 263 - -
Rops11g01800 525 Pfam Protein kinase domain 114 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01800 525 Pfam Protein kinase domain 312 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01800 525 SUPERFAMILY Protein kinase-like (PK-like) 95 468 IPR011009 -
Rops11g01800 525 CDD STKc_NDR_like 110 484 - -
Rops11g01800 525 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Rops11g01800 525 Gene3D Phosphorylase Kinase; domain 1 102 197 - -
Rops11g01800 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 454 - -
Rops11g01800 525 Gene3D Transferase(Phosphotransferase) domain 1 198 436 - -
Rops11g01800 525 SMART pkinase_C_6 420 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops11g01800 525 CDD MobB_NDR_LATS-like 46 107 - -
Rops11g01800 525 MobiDBLite consensus disorder prediction 495 525 - -
Rops11g01800 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01800 Rops-Chr11 28898950 28916440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01800 9 524 AGC Kinase Gene Family AT2G19400 75.962 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Rops11g01800 Pkinase 6.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01800 K08790 - gmx:100811359 895.575