Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01795 ATGAATTTCTTCATTTTGAGTGTGGCTGTAAGGTCCCAACTGACCCCATATTATTATATGACAACGTGCCCTGATCTTTGGGGAATAGTGAGGACAGAGGTTCACAACGCTCTAAGAAATGAGATGCGAATGGGTGCTTCTTTGCTTCGGCTGCACTTCCATGATTGCTTTGTAAATGGTTGTGATGGTTCAGTTCTGCTGGATGGAGGCCAAGATAGTGAGAAATTCGCTACTCCTAACTTGAATTCGGCTAGAGGATTTGAAGTTATAGATACAATCAAAAGTTCACTGGAGAGTGCATGTAGTGGAGTTGTGTCCTGTGCTGATATATTAGCCATTGCTGCTAGAGATTCTGTTCTCCTCAGTGGGGGTCCTTTTTGGTTTGTTCAGCTAGGAAGGAGAGATGGATTAGTCTCAAACAAGACACTGGCAAATCTTGCACTTCCTTCTCCATTTGACAAACTAGATACTATCATTTCCAAGTTTAATAACGTTGGCCTCAATCTCAAAGACGTTGTCACTTTATCAGGTTCCCATACTATTGGACGAGCAAGGTGCACTTTTTTCAGCAATAGATTGTTCAACTTCTCAGGGACAGGAGAACCAGACAGTACTATAGAAACTGACATGCTCACTGAATTGCAAAATTTGTGCCCACAAAATGGAGATGGGAACAAAACTAGTGTGCTAGACCCTAATTCAGTGGATCTTTTTGATAACCACTACTTCAAGAACTTACTCAATGGAAGGGGACTCCTTGGTTCTGACCAGATTCTCTTTTCAAGTGATGAGGCCACTACAACAACCACTAAACCTTGGGTCCAATTTTATAGCGAAAACGAAAGAATTTTCCTAATGGAATTTGCCTATGCCATGATCAAGATGGGGAATATAAATCCAAAAACTGGTTCTGAGGGAGAGATTAGGAAGAACTGCAGAGTAATTAACTCTTAA 954 0.4119 MNFFILSVAVRSQLTPYYYMTTCPDLWGIVRTEVHNALRNEMRMGASLLRLHFHDCFVNGCDGSVLLDGGQDSEKFATPNLNSARGFEVIDTIKSSLESACSGVVSCADILAIAARDSVLLSGGPFWFVQLGRRDGLVSNKTLANLALPSPFDKLDTIISKFNNVGLNLKDVVTLSGSHTIGRARCTFFSNRLFNFSGTGEPDSTIETDMLTELQNLCPQNGDGNKTSVLDPNSVDLFDNHYFKNLLNGRGLLGSDQILFSSDEATTTTTKPWVQFYSENERIFLMEFAYAMIKMGNINPKTGSEGEIRKNCRVINS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01795 317 FunFam Peroxidase 149 295 - -
Rops11g01795 317 CDD secretory_peroxidase 13 315 IPR033905 GO:0004601|GO:0042744
Rops11g01795 317 Gene3D - 18 316 - -
Rops11g01795 317 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 47 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 23 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Plant peroxidase signature 170 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Haem peroxidase superfamily signature 45 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 PANTHER PEROXIDASE 72-RELATED 6 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 171 181 IPR019793 -
Rops11g01795 317 ProSitePatterns Peroxidases active site signature. 45 56 IPR019794 GO:0004601
Rops11g01795 317 FunFam Peroxidase 17 165 - -
Rops11g01795 317 ProSiteProfiles Plant heme peroxidase family profile. 13 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 Gene3D Peroxidase, domain 2 149 295 - -
Rops11g01795 317 Pfam Peroxidase 30 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01795 317 SUPERFAMILY Heme-dependent peroxidases 13 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01795 Rops-Chr11 28838956 28841439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01795 5 316 Peroxidase AT5G19890 62.179 1.09e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01795 K00430 - gmx:100787073 481.87