Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01775 ATGAAGAAGGGGGTGGTTTTGGCACTGGTTCTGCAGTTGTTGAAGCTTTGTATCATTGGCTTTGCTGTGGCAGCACAAGGATCTGAAGGGTCTGTTAAGTCCCCATCTCCAGCATTCCTTCCTGCTGTTGATCCTAGAGGAGAAGCACCTGGTCCTATCCATGATGGACAATCATGGGAAAGCAGTGCATCAAACCCTCCAGAGCCAAATGGGTTTGTTATATCCCCATCTCCAGCAACCTTACCTGTGGATCCTTCCCCCAGTGAAGCACCTGGTCTTTTACAACCAAATGGATCATTCTTGCACCCTCCAGTTACATTACCACCTCCTGCATCATCTCCAATTCATAAGAAGATTAAAGGAATTGAACCATCCATATCTCCTAGTCCTAGTCCTAGTCCAAGCACCATAACATTATCACCACCATATAAGGCTGTACCTACACCATCAAATGCTGAAAGGAATGTGCCACCATCCATACAGCCAAGTCCACCTCAAAGGACAGCACCTGCACCTGCTGTCAGGCTTCCTGCATCCACACCAACTGCTCCAGCTCCTGTTGCAATACCTTCTGGCAATTTGCCAAAAACTTCACCTGTCAGCCAACCAAGTGAACATGGAAGTATGCCTCCTGAAGTTGATAAGAGGAATGAAAGTAAGAGTCACAACCCAGAACCAGTTTCACCTGCCCCAGTTACAATACCTTCTACCAATTTGCCCAAAATTTCGCCAGTAAGCCATCCAACTGCAAATGGAAGTTTTCCTCCTGATGCTCATAAAGGTCACACACCAGAGTCAATTTCACCAGCCCCTGAAATCAATTTGCCCAAACATTCCCCAGTTAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAACTGTTCACAGAAGGAATTCCAGCTCAGGTCACACATTGGAGCCAGTTTCCCAAGCTCCAGTTGCATTATCTCCTGCAATTTTACCAAAAGATTCGCCAGTCAGCCAACCAACTCATAATGGAAGCTTTCCACCTAATGTTCATAATAGAACTGCAAATAAGGGTCATACTCATACCCCGGAGCCAGTAATGCCATCTCCAGTTGCATCACCACCACTGGTCCACCCAGCCATACCAGCAGCATCTCCATCCAAATTACCAGTGCCTGTTATCTCTCCCGCATCAACACCTTCCAGAAGCTTCAATTGGAAAAATGGTGGAGAACCAGTTTCTGCACCTTTGTACAAAACACCAAAGCCACTACCGGCTATAGTACACCATTCCCCTGCCCAAGCACCTGTTATCTCTCCCAAATCAACACCTTCTAGAAGTTTCAATTGGAAAAATGGTGGAGAACCAGTTTCTGCACCTTCACACAAAATACCAAAACCATTGCCGGCTATAGTACATTCCCCTGCCCAAGCTCCTGCTGAACATAAAGCAAGGCAATTTCATCATGCTCCTGAGCCATCGATGTCATCTCCTAAATATCCTTCCAATAAAGATCATCCTCCTGCATCTTCACCTTCAACCACATTTTATAAGCATCACCATATGAGGAACACAATCATCAGCCCAGCTCCAGCATCATCATATTTGGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTACGTCCAACAAGTGGACGAAGACATCATGCTCCACCACCAATGAACTCAGGTTCTTCAGTTTCTCCATTCGCCTTCCCTATTCAATCACCAATGAGCCAGGTTTCACCTGCTCCATCTCCATCATTCAAAATATCCCCACACTCAACCAAAATTCCATTTCATCCTCCTAAAGTATCTCCTTCTCGGCCTTCTTCCAAGAGCCCTAAGAAGCCATTCTTTTCTCAAGTTCAAGCATTGCCACCCCCACCTCCCAATGAAGATTGTTTCACAACTGTTTGCGCGGATCCCTATACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTCTGGCCCATGAAAGTTGGCCTTCGCCTTAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAGGCAATGTCAAGTTCGCATTATGGGAGCCAATGCAGCAAGCCAGCAACAAGATAAAACTGATGCCCTCATTGATTTGGTACCACTAGGGGAAGAATTTGACAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAGGTTGTTATAAAAGCTTCTTACTTTGGTGATTATGAAGTGTTATATGTGAGCTATCCAGGTTTACCACCATCTCCTCCTTTACCACCTTCAAGCATTAACATGATAGATGGTGGCCCATATTCAAGTGATGGAAATAATGGTAGGACAATAAAGCCCCTTGGGGTTGACATACAAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGCATAATAGTTATTATTGCTCTTTCAGTTTTTCTAGCAGTTATTTTATGCTCTGCTGCTGCTTTGGCCCTGTTCAAATACAGAGATCATGTGAGTCAACCAACATCAACCCCACGGGTTTTGCCGCCTTCTCTTACCAAAGCACCAGGTACTGCTGGGTCATTAGGTGGAGGTGCGCTCGCTTCAGCTTCATCATCATTTCAATCCAGCATTGCTGCTTATACAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAGGCCACCGATAATTTTCATGATTCCGGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTATCTTGGTATCTTTGAAGATGGGACAAAAGTAGCAGTCAAGGTTCTAAAAAGGGAGGATCATCATGGTGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGCCGCCTTCACCATAGGAATTTGGTAAAATTGATTGGTATATGTCAAGAGATCAGCTTCCGCTGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGCTGACAGGGAAAACAGCCCCCTTGATTGGAGTGCTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTGGCTTATCTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAGTCTAGCAATATCTTGCTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGACTGGCTCGAACAGCAGCTGATGAGGGTAACCGACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTGGCTCCGGAGTACGCGATGACTGGTCACCTTCTGGTAAAGAGTGATGTTTACAGCTATGGTGTTGTCCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTAGACATGTCACAACCTCCTGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCACTCCTCACAAGTAGAGAAGGATTGGAAGCAATAATTGATCCATCTCTAGGAACTGATGTGCCCTTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTATCAGACCGTCCTTTCATGGGTGAAGTTGTTCAGGCTTTGAAACTTGTGTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAAGAAGTTCTAGCCATGAGGATTTATCTGTTGATTTGAGCACTGTTTCTGGACAACTACCAGATAATTTCCAAGGCCAATTCTCAGCCACTAAGTATGATTCTGGATATGATATTGAAAAGGGGTTGTCAGCATCTGAGTTATTCAGCTCCTCAGCAAGATTCGGAAGGGAAGTATCTGGATCATTTAGAAGGCATTCTTATTCAGGTCCTTTGAGAACTGGAAGAAGCAGGCGGTTATGGCAGATAATTAGAAAGCTTTCTGGTGGTAGTGTCAGTGAACATGGAACAATGTTCAAGCTATGA 3849 0.4466 MKKGVVLALVLQLLKLCIIGFAVAAQGSEGSVKSPSPAFLPAVDPRGEAPGPIHDGQSWESSASNPPEPNGFVISPSPATLPVDPSPSEAPGLLQPNGSFLHPPVTLPPPASSPIHKKIKGIEPSISPSPSPSPSTITLSPPYKAVPTPSNAERNVPPSIQPSPPQRTAPAPAVRLPASTPTAPAPVAIPSGNLPKTSPVSQPSEHGSMPPEVDKRNESKSHNPEPVSPAPVTIPSTNLPKISPVSHPTANGSFPPDAHKGHTPESISPAPEINLPKHSPVSQPTEHGSLPPTVHRRNSSSGHTLEPVSQAPVALSPAILPKDSPVSQPTHNGSFPPNVHNRTANKGHTHTPEPVMPSPVASPPLVHPAIPAASPSKLPVPVISPASTPSRSFNWKNGGEPVSAPLYKTPKPLPAIVHHSPAQAPVISPKSTPSRSFNWKNGGEPVSAPSHKIPKPLPAIVHSPAQAPAEHKARQFHHAPEPSMSSPKYPSNKDHPPASSPSTTFYKHHHMRNTIISPAPASSYLVSPPTSKHQDQPIPPSLRPTSGRRHHAPPPMNSGSSVSPFAFPIQSPMSQVSPAPSPSFKISPHSTKIPFHPPKVSPSRPSSKSPKKPFFSQVQALPPPPPNEDCFTTVCADPYTNSPPGAPCRCVWPMKVGLRLSVPLYTFFPLVSELASEIATGVFMRQCQVRIMGANAASQQQDKTDALIDLVPLGEEFDNTTAFLTSERFWHKQVVIKASYFGDYEVLYVSYPGLPPSPPLPPSSINMIDGGPYSSDGNNGRTIKPLGVDIQKRQHKGGLSKGIIVIIALSVFLAVILCSAAALALFKYRDHVSQPTSTPRVLPPSLTKAPGTAGSLGGGALASASSSFQSSIAAYTGSAKTFSMNEIEKATDNFHDSGILGEGGFGRVYLGIFEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICQEISFRCLVYELIPNGSVESHLHGADRENSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEGNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTDVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSRSSSHEDLSVDLSTVSGQLPDNFQGQFSATKYDSGYDIEKGLSASELFSSSARFGREVSGSFRRHSYSGPLRTGRSRRLWQIIRKLSGGSVSEHGTMFKL* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01775 1282 Pfam Protein tyrosine and serine/threonine kinase 899 1167 IPR001245 GO:0004672|GO:0006468
Rops11g01775 1282 PANTHER OS01G0750732 PROTEIN 622 1194 - -
Rops11g01775 1282 ProSitePatterns Protein kinases ATP-binding region signature. 900 922 IPR017441 GO:0005524
Rops11g01775 1282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1016 1028 IPR008271 GO:0004672|GO:0006468
Rops11g01775 1282 Gene3D Transferase(Phosphotransferase) domain 1 970 1191 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 425 443 - -
Rops11g01775 1282 ProSiteProfiles Protein kinase domain profile. 894 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01775 1282 MobiDBLite consensus disorder prediction 422 505 - -
Rops11g01775 1282 CDD STKc_IRAK 900 1168 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 28 378 - -
Rops11g01775 1282 Gene3D Phosphorylase Kinase; domain 1 865 969 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 520 622 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 234 250 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 278 307 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 485 505 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 556 588 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 520 541 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 356 370 - -
Rops11g01775 1282 FunFam receptor-like serine/threonine-protein kinase ALE2 867 969 - -
Rops11g01775 1282 MobiDBLite consensus disorder prediction 323 345 - -
Rops11g01775 1282 FunFam Receptor-like serine/threonine-protein kinase ALE2 970 1188 - -
Rops11g01775 1282 SUPERFAMILY Protein kinase-like (PK-like) 874 1167 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01775 Rops-Chr11 28478448 28489289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01775 345 1278 Receptor kinase-like Gene Family AT5G56890 54.762 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops11g01775 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01775 - - gmx:100802309 1865.51