Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01753 ATGGCATTGGATATGGTAGATGTTCCCAGGATCAGGATGGAAGAGAAGATGGCAATTGAAGAAGAAGCTGCTTCGGCTAGGTTAAAGGGCATGGACCATCTCATTCGAATCCTTTCTTCTCAAACCCCTTCTTCTTCTTCTTCTTACAATTCTTGTTCTTCAAGCTACAACAACAACAACCTCACCCTGAACAACCTCGACTTCTCCGAAATCACCGATTTCACCGTCTCCAAGTTCAAACAGGCCATTAACCTCTTGAATCGCACCGGCCACGCCCGTTTTCGCCGGGCACCACCACAACCCAACCCTCAACCTCAACTTGAACCTCAGACACAGGGCTTGACTCTAGATTTTGCAAAAAAACCCAACATCCTCAACTCCAAGCCCAACAATACGGACGACACTCTCACCATGTCCACCACCACCACCAAGTCCTCCGTCACCGCCGATGCCAGCGTCTCCGACGGCAAGATAGGTCCCTTCACCGCCAAGCCCCCTCTCTCCACCTCTCACCGGAAGAGGTGTCACGACGCCACCCTCTCCTCTGCCCAATGCCATTGTTCCAAAAAAAGGAAATTACGAGTGAAACAAACGATCCGCGTGCCGGCGATAAGCTCGAAAATCGCCGATATCCCACCGGACGAGTATTCTTGGAGGAAGTACGGTCAAAAACCGATCAAGGGTTCACCATACCCTCGTGGGTACTACAAGTGCAGCACCGTGAAAGGGTGTCCGGCGAGGAAGCAAGTGGAGAGAGCCCAAGACGATCCCAAGATGCTGATCGTCACGTTCGAGGGCGTGCACCGTCACCCACCGAAGCTGCAAAACGGCGTCGGTTTCAGCCTCTACTCAAGTTGA 858 0.5233 MALDMVDVPRIRMEEKMAIEEEAASARLKGMDHLIRILSSQTPSSSSSYNSCSSSYNNNNLTLNNLDFSEITDFTVSKFKQAINLLNRTGHARFRRAPPQPNPQPQLEPQTQGLTLDFAKKPNILNSKPNNTDDTLTMSTTTTKSSVTADASVSDGKIGPFTAKPPLSTSHRKRCHDATLSSAQCHCSKKRKLRVKQTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVKGCPARKQVERAQDDPKMLIVTFEGVHRHPPKLQNGVGFSLYSS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01753 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 273 IPR044810 GO:0003700
Rops11g01753 285 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g01753 285 FunFam WRKY transcription factor 65 196 273 - -
Rops11g01753 285 Pfam WRKY DNA -binding domain 214 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g01753 285 MobiDBLite consensus disorder prediction 122 142 - -
Rops11g01753 285 SUPERFAMILY WRKY DNA-binding domain 210 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g01753 285 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g01753 285 Gene3D WRKY domain 199 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g01753 285 MobiDBLite consensus disorder prediction 124 142 - -
Rops11g01753 285 Pfam Plant zinc cluster domain 172 210 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01753 Rops-Chr11 28103800 28105207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01753 1 270 WRKY Transcription Factor Family AT2G24570 45.820 5.38e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops11g01753 WRKY 3.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01753 - - gmx:100127391 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01753 11 28103800 28105207 Rops11g01753 11 28103800 28105207 ECH
Rops2g05222 2 93156876 93158433 Rops11g01753 11 28103800 28105207 PCT