Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01744 ATGAGTTTCCCGAACGGTTCTTCACCGGTGCCGCCGGAAAATGATATAGAGGCCGGACCGGTGACTCGCCGCTTCTCCCACGTCGATGATGGTGATATCTCCGATCCGTTTGATATTGCCAGAACGAAAAACGCTTCGATTGAACGACTCAGGCGCTGGAGGCAAGCGGCACTTGTGTTGAATGCTTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAGGAAGAAGAGAAGAAGAAGATATTGAGAAAGATTAGAGCGCATGCACAAGCCATTAGAGCAGCATATCTTTTCAAAGCAGCTGCGGGTGGGGGGCCAGTGAGTGAAACTATAAAACCTCCTACGACCCCCACTGGTGAATTTCCTATTGGACAAGAGCAACTTGCTTCAATTTCAAGGGAGCATGATACTGCTGCTCTGCAGGAATATGGAGGGGTTGTAGGGATATCAAATTTATTGAAGACCAATTTAGAGAAGGGAATTCATGGTGATGATGCTGACTTACTAAAACGGAGGAATGCATTTGGTTCCAACAATTATCCTCGAAAGAAAGGAAGAAGTTTTTTGATGTTTATTTGGGATGCTTGCAAGGATCTGACCTTGGTTATTTTAATGGTAGCTGCAGCAGCTTCATTGGGGCTGGGGATAAAATCTGAGGGTATTAAGGAAGGTTGGTTTGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTATTGTTACAGCCATAAGTGATTATAAGCAGTCTCTTCAGTTTCGAGACCTAAATGATGAGAAGAGAAATATACACCTGGAGGTTGTTAGAGGTGGTCGAAGGGTTGAGATCTCAATATATGATATTGTTGTTGGGGATGTTATACCTCTTAATATTGGTAACCAGGTCCCCGCTGATGGAATTCTGATCGCTGGTCACTCTCTGGCAATTGATGAATCAAGCATGACAGGGGAGAGCAAAATTGTCCGTAAGGATTCTAAGGATCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTAACGGGTGTTGGTCTTAATACTGAATGGGGGCTTCTAATGGCTAGCATTTCAGAAGATACTGGTGAAGAAACACCTTTGCAGGTCCGCTTAAATGGTGTAGCAACCTTCATTGGTATTGTTGGACTCTCTGTTGCTGTTCTTGTCCTGATCGTGCTACTGGCCAGATTTTTCTCTGGGCATACTAAAAACCCAGATGGGAGCGTTCAATTTAAAGCAGGCCAGACTAAAATTGGTGATGCTATTGATGGAGCAATTAAGATAGTAACCGTTGCGGTCACCATTGTAGTGGTTGCTGTGCCTGAGGGGCTCCCATTAGCAGTTACCTTGACACTGGCCTACTCGATGAGAAAAATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCTACAACAATATGCAGTGATAAGACTGGGACATTGACTATGAATCAGATGACTGTGGTTGAGGCTTATGCTGGGGGCAATAAGATTGATCCTCCTCACCAGTTGGAGAGCTGTCCTATGGTACGCTCTCTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGCGTTTACATACCTGAGGGTGCTAATGATGCTGCTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACAATGGGGGATAAAGCTTGGGATGAATTTTTCGGCTGCTCGGTCAGAATCGTCAATTATTCACGTCTTTCCATTCAATTCCGAGAAAAAAAGAGGCGGTGTTGCAATACAGACGGCCAACTCTGACATCCATATACATTGGAAAGGTGCTGCGGAGATAGTTCTAGCTTGCTGTACAGGGTATATTGATTCAAATGACCAGTTGGTGGAGATGGACGAGGAAAAGATGACATTTTTCAGAAAAGCTATTGAAGACATGGCTGCTGATAGTCTACGTTGTGTTGCTATTGCATATAGATCATATGAAAAGGAGAAAGTTCCAACTAATGAAGAACTACTTGATCACTGGGCTTTACCAGAAGATGATCTTGTTTTACTCGCTATTGTTGGTCTTAAGGATCCTTGTCGACCTGGTGTCAAAGATGCAGTACAACTTTGCCAAAAAGCTGGGGTTAAGGTCAAAATGGTCACTGGTGACAATGTCAAAACTGCTATAGCAATTGCTATGGAATGTGGAATACTTCGTTCATTTGCAGATGCTACAGAGCCAAACATCATTGAAGGAAAGACATTTCGTGCCCTGTCAGATGCAGAGAGAGAAGAAATTGCTGAACAAATATCAGTTATGGGACGGTCATCTCCCAATGACAAACTACTGTTGGTACAAACCTTGAGGAGGAAGGGTCATGTTGTGGCTGTAACAGGGGATGGAACAAATGATGCTCCTGCACTTCATGAGGCCGATATAGGTCTTGCAATGGGTATTCAAGGTACAGAAGTTGCCAAAGAGAGCTCCGATATCATTATTTTGGATGACAATTTTGCTTCAGTGGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTGACAGTCAATGTGGCTGCTCTTGTTATAAATGTTGTTGCTGCAGTTTCCTCTGGTGATGTCCCACTAAATGCAGTGCAGCTTCTCTGGGTTAATCTTATCATGGATACTCTGGGAGCACTAGCCTTGGCAACTGAACCACCAACTGATCACCTGATGGATCGGTCTCCTGTGGGTCGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTACCAAGTGACCATCTTGCTGGTACTCAATTTCCGAGGTGTTAGCATACTGGGTCTGAGGCATGAGCAGAATGCGATCAAAATAAAAAACACTTTGATCTTCAATGCATTTGTTTTCAGTCAAATCTTTAATGAATTTAATGCACGAAAGCCAGATGAATTCAACATATTTAAAGGAGTCACGAAAAACTACCTCTTTATGGGGATAGTGGGATTAACTGTTGTGCTTCAGATTATCATCATAGAATTTCTTGGGAAGTTCACTAAAACAGTCAAGCTTAATTGGAAGCAGTGGCTCATTTCTATCATTATTGGAGTGATTAGTTGGCCTCTTGCTGTGGTTGCGAAATTGATACCAGTTCCAGCAACTCCCGTCAATAACGTGTTTTCAAGACTTCGTTGTGGAAGAACTTCAAAAAGTAAGGAACCTGAGGCTCCTCAGTAG 3252 0.4333 MSFPNGSSPVPPENDIEAGPVTRRFSHVDDGDISDPFDIARTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKKKILRKIRAHAQAIRAAYLFKAAAGGGPVSETIKPPTTPTGEFPIGQEQLASISREHDTAALQEYGGVVGISNLLKTNLEKGIHGDDADLLKRRNAFGSNNYPRKKGRSFLMFIWDACKDLTLVILMVAAAASLGLGIKSEGIKEGWFDGGSIAFAVILVIIVTAISDYKQSLQFRDLNDEKRNIHLEVVRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILIAGHSLAIDESSMTGESKIVRKDSKDPFLMSGCKVADGSGTMLVTGVGLNTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVLVLIVLLARFFSGHTKNPDGSVQFKAGQTKIGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGNKIDPPHQLESCPMVRSLLIEGVAQNTNGSVYIPEGANDAAEVSGSPTEKAILQWGIKLGMNFSAARSESSIIHVFPFNSEKKRGGVAIQTANSDIHIHWKGAAEIVLACCTGYIDSNDQLVEMDEEKMTFFRKAIEDMAADSLRCVAIAYRSYEKEKVPTNEELLDHWALPEDDLVLLAIVGLKDPCRPGVKDAVQLCQKAGVKVKMVTGDNVKTAIAIAMECGILRSFADATEPNIIEGKTFRALSDAEREEIAEQISVMGRSSPNDKLLLVQTLRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVTILLVLNFRGVSILGLRHEQNAIKIKNTLIFNAFVFSQIFNEFNARKPDEFNIFKGVTKNYLFMGIVGLTVVLQIIIIEFLGKFTKTVKLNWKQWLISIIIGVISWPLAVVAKLIPVPATPVNNVFSRLRCGRTSKSKEPEAPQ* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01744 1083 Pfam Cation transporting ATPase, C-terminus 879 1054 IPR006068 -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 194 251 - -
Rops11g01744 1083 PANTHER CATION TRANSPORTING ATPASE 108 1056 - -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 45 101 - -
Rops11g01744 1083 SFLD p-type atpase 468 846 IPR044492 -
Rops11g01744 1083 Pfam E1-E2 ATPase 264 464 - -
Rops11g01744 1083 SUPERFAMILY HAD-like 484 899 IPR036412 -
Rops11g01744 1083 PRINTS Sodium/potassium-transporting ATPase signature 605 623 - -
Rops11g01744 1083 PRINTS Sodium/potassium-transporting ATPase signature 229 249 - -
Rops11g01744 1083 PRINTS Sodium/potassium-transporting ATPase signature 479 500 - -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 811 1058 - -
Rops11g01744 1083 SMART Cation_ATPase_N_a_2 142 216 IPR004014 -
Rops11g01744 1083 CDD P-type_ATPase_Ca_PMCA-like 168 927 - -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 496 694 - -
Rops11g01744 1083 ProSitePatterns E1-E2 ATPases phosphorylation site. 488 494 IPR018303 -
Rops11g01744 1083 Pfam Ca2+-ATPase N terminal autoinhibitory domain 35 77 IPR024750 GO:0005516
Rops11g01744 1083 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 699 IPR023299 GO:0000166
Rops11g01744 1083 Gene3D - 45 100 - -
Rops11g01744 1083 Gene3D - 496 694 IPR023299 GO:0000166
Rops11g01744 1083 PRINTS P-type cation-transporting ATPase superfamily signature 687 698 - -
Rops11g01744 1083 PRINTS P-type cation-transporting ATPase superfamily signature 310 324 - -
Rops11g01744 1083 PRINTS P-type cation-transporting ATPase superfamily signature 709 719 - -
Rops11g01744 1083 PRINTS P-type cation-transporting ATPase superfamily signature 486 500 - -
Rops11g01744 1083 PRINTS P-type cation-transporting ATPase superfamily signature 818 830 - -
Rops11g01744 1083 PRINTS P-type cation-transporting ATPase superfamily signature 794 813 - -
Rops11g01744 1083 Gene3D - 167 362 - -
Rops11g01744 1083 SUPERFAMILY Calcium ATPase, transduction domain A 264 359 IPR008250 -
Rops11g01744 1083 Gene3D - 194 1053 - -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 241 362 - -
Rops11g01744 1083 Gene3D - 483 839 IPR023214 -
Rops11g01744 1083 Pfam Cation transporter/ATPase, N-terminus 144 211 IPR004014 -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 688 839 - -
Rops11g01744 1083 FunFam Calcium-transporting ATPase 9 plasma membrane-type 340 510 - -
Rops11g01744 1083 NCBIfam HAD-IC family P-type ATPase 427 509 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops11g01744 1083 NCBIfam HAD-IC family P-type ATPase 760 874 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops11g01744 1083 NCBIfam calcium-translocating P-type ATPase, PMCA-type 134 1056 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops11g01744 1083 Pfam haloacid dehalogenase-like hydrolase 483 808 - -
Rops11g01744 1083 SFLD Haloacid Dehalogenase 468 846 - -
Rops11g01744 1083 SUPERFAMILY Calcium ATPase, transmembrane domain M 144 1056 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01744 Rops-Chr11 27808073 27836097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01744 15 1081 Primary Pumps ATPases AT5G57110 73.296 0.0 1585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01744 K01537 - gmx:100792945 1857.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01744 11 27808073 27836097 Rops11g01744 11 27808073 27836097 ECH
Rops2g05226 2 93255463 93285740 Rops11g01744 11 27808073 27836097 PCT