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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops11g01743
ATGAGTGAGTACTGGTGCAACCCAGATATGTTGTCGTTTAATAACTTGATTGAGCACTTGTGTGATGATAACATGATTGTGGAAGCTAGGGAGGTTTATGGAGACATTGAGATAAAAGAAATGGTTATTTTAGGGCAAAGAAATGGAGGCTTATGGATAGAGAAATGGAGGTTTTTGCATGATACAACCAATTATTTTAGGGAAACGGTGGAATCTGGGCTGAGGCCTAACCTAGTTGTTTACAATAGGTTGGTTGATGACTTGGTTAAAATCAGGAAGATTGACGAGACCAAGTATTTCTTTGATCCAATGGCAAAGAAGCTCATGATGGATGTTGCTAGCTATCAGTTCATGATGAAGGTGTTGAGTGAGGCAGGAAGATTGGATGAAGTGCCTCAAATTGTTCATATCTTGTTGAATGACAATGGGGTTGATTTTATTAGAAAGAAAGAACAGCATAGTGACATCGAGATGACCAAAGAAGAAGTGAAAGCGGTGGTTCCTGAATCCGTTTTGAAGAAGCAGAAAAGGAACGAGGAATGGGCTTTGGCGAAAAAGCAGGAACTTGAAGCCGCTAAGAAGAAGAGGTCCGAAACGCGCAAACTCATTTGCAGCAGAGCCAAACAGTACTCAAAGGAATACGATGAACAGCAAAAGGAACTGATTCGGTTGAAGCGGGAAGCCAAGCTTAAGGGTGGGTTTTATGTTGACCCAGAAGCAAAGCTCTTGTTCATTATCAGGATCAGAGGTATCAATGCTATGCACCCCAAAACAAGGAAGATTCTGCAGCTTCTGCGTTTGAGACAGATCTTTAATGGCGTCTTTCTCAAAGTCAACAAAGCAACCATGAATATGCTTCACAGGGTGGAGCCATATGTTACCTATGGGTACCCTAATTTGAAAAGTGTGAGAGAATTGATCTACAAGAGGGGCTACGGAAAAGTTGACAAGCAGAGAATTGCTTTGACAGACAACTCTATTATTGAACAGACTTTGGGAAAGCATGGGATTATTTGCATTGAAGATCTGATCCATGAGATTATGACTGTTGGACCTCACTTCAGGGAGGCCAATAACTTCCTATGGCCTTTTAAGCTCAAAGCTCCCCTGGGCGGTTTGAAGAAGAAAAGAAATCATTATGTGGAAGGTGGTGATGCTGGCAACAGGGAAAATTACATAAATGAGCTTATTAGAAGGATGAATTAG
1206
0.4138
MSEYWCNPDMLSFNNLIEHLCDDNMIVEAREVYGDIEIKEMVILGQRNGGLWIEKWRFLHDTTNYFRETVESGLRPNLVVYNRLVDDLVKIRKIDETKYFFDPMAKKLMMDVASYQFMMKVLSEAGRLDEVPQIVHILLNDNGVDFIRKKEQHSDIEMTKEEVKAVVPESVLKKQKRNEEWALAKKQELEAAKKKRSETRKLICSRAKQYSKEYDEQQKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDKQRIALTDNSIIEQTLGKHGIICIEDLIHEIMTVGPHFREANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN*
402
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops11g01743
401
Gene3D
-
348
401
IPR036919
-
Rops11g01743
401
Gene3D
-
242
347
IPR036919
-
Rops11g01743
401
PANTHER
60S RIBOSOMAL PROTEIN L7
165
401
IPR039699
-
Rops11g01743
401
CDD
Ribosomal_L7_archeal_euk
242
401
IPR035808
-
Rops11g01743
401
FunFam
60S ribosomal protein L7
347
401
-
-
Rops11g01743
401
ProSitePatterns
Ribosomal protein L30 signature.
261
293
IPR018038
-
Rops11g01743
401
NCBIfam
60S ribosomal protein uL30
168
401
IPR005998
GO:0000463|GO:0003735|GO:0022625
Rops11g01743
401
SUPERFAMILY
Ribosomal protein L30p/L7e
242
401
IPR036919
-
Rops11g01743
401
Gene3D
Tetratricopeptide repeat domain
1
219
IPR011990
GO:0005515
Rops11g01743
401
FunFam
60S ribosomal protein L7
242
346
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops11g01743
Rops-Chr11
27763729
27767092
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops11g01743
158
401
Cytoplasmic Ribosomal Protein Gene Family
AT3G13580
84.836
3.77e-154
433
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops11g01743
K02937
-
gmx:100500011
423.32
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Rops11g01743
11
27763729
27767092
Rops11g01743
11
27763729
27767092
ECH
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