Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01721 ATGGAGATCACAAATATTGTGCTGACGAAGCCATTCTCATTAGGAAGCGAATCAGATTCTGAGAAGGTTTATAGTGCTCCAAATATTTTGCACCGAACATTGAGTCTATTCAAGAATTTGCGGGCAGGATCTGATATCACTTGTTTTCAGTTGCCACCAATATTCAACTTCCCAAAGTCACAACTTCAGTGCTATGGTGAATCTGTATATTCAACAGCTTCAGACATGCTAAGCAAGTGCAACACTGGGCAGGACCCACTTGATAGATTCATATCTGTTGTAGCATGGAGCATATCTACCACACGCCCAACAATTTTTGGAGTTGCTCCCTACAACCCCATTCTTGGAGAGACCCATCATGTTTCCAAAGGAAATCTCAACATCTTACTAGAGCAGGTTTCACACAACCCACTTGTATCTGCCCTCCATGCAACTGATGAGAAGGAAAGCATAGAAACTATATGGTGCATGAATCCTGTTGCAAAGTTCCATGGTACCTCAGTGGAAGCTAAGGTGAATGGCAAGAGGCAGCTGAAGCTCCTCAATCATGGAGAGACATATGAAATGAATTCTCCTAGCCTCTTTATCAGAATTCTTCCAGTCCCTGGAACTGATTGGGTTGGCAATGTCAATATCCGGTGCCTAGAAACAGGCCTAGCGGCTGAGTTATGCTACATAAGTCAATCTTTCCTTGGATTTGGGGGAAAAAGAAGCTTGATAAAAGGGAAGATCATTGATTCAGCATCATTGAAGATTCTATTTGAAGTTAATGGTCATTGGGATAGTACTGTAACACTGAAGGATACATATAATGCAGAAGAAAGAGTGATATATGATGCCAAAAAAGTCATTTCAGGGCTCCAAGCTCCTACTGTCAAGGATGCACAGAGTGTGTGGCCAACTGAATCAGCACTTATGTGGAGCGAGTTGAGCCAAGCCATCCTGAGCAAAGACTGGGAAAAAGCAACAGAAGCAAAGAAAGTTGTGGAGGAAAGACAAAGGGAGCTCTTGAGAGAAAGAGAGTCAAAAGGGGAAACTTGGGTTCCTAAACACTTCATTGTGTCTCAAAACAAAGAAGGGGGTTGGGACTGTTCACCTATTCAAAAGAGGGTCTCAGCCTCTCCTATTGTGACCTTGTAA 1140 0.4281 MEITNIVLTKPFSLGSESDSEKVYSAPNILHRTLSLFKNLRAGSDITCFQLPPIFNFPKSQLQCYGESVYSTASDMLSKCNTGQDPLDRFISVVAWSISTTRPTIFGVAPYNPILGETHHVSKGNLNILLEQVSHNPLVSALHATDEKESIETIWCMNPVAKFHGTSVEAKVNGKRQLKLLNHGETYEMNSPSLFIRILPVPGTDWVGNVNIRCLETGLAAELCYISQSFLGFGGKRSLIKGKIIDSASLKILFEVNGHWDSTVTLKDTYNAEERVIYDAKKVISGLQAPTVKDAQSVWPTESALMWSELSQAILSKDWEKATEAKKVVEERQRELLRERESKGETWVPKHFIVSQNKEGGWDCSPIQKRVSASPIVTL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01721 379 FunFam Oxysterol-binding protein-related protein 4C 114 291 - -
Rops11g01721 379 SUPERFAMILY Oxysterol-binding protein-like 33 364 IPR037239 -
Rops11g01721 379 Pfam Oxysterol-binding protein 36 357 IPR000648 GO:0008289
Rops11g01721 379 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 34 352 IPR000648 GO:0008289
Rops11g01721 379 Gene3D - 299 374 - -
Rops11g01721 379 FunFam Oxysterol-binding protein-related protein 4B 299 371 - -
Rops11g01721 379 Gene3D - 115 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01721 Rops-Chr11 27145082 27151239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01721 K22285 - gmx:100783943 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01721 11 27145082 27151239 Rops11g01721 11 27145082 27151239 ECH
Rops2g05246 2 93576217 93590462 Rops11g01721 11 27145082 27151239 PCT