Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01713 ATGGCTGTTGGGAGTGACGATGGCCTTCAGAACAAGCTTTTGGATCTCGTGGACCGTCCCAATGTTTCCAATTTCAGTTGGAACTATGCGATTTTCTGGCAACTTTTGCAGTCAAAATCTGGGGACTGGGTTTTGGGTTGGGGAGATGGTTGTTGCAGGGAACCAAATGAGGAAGAAGAACGTGCAGAGGAAGATGAAGAAAGAAAGGGTAACACCAGCAAGCGGCGGAGCTCTTCACGGTAG 243 0.4897 MAVGSDDGLQNKLLDLVDRPNVSNFSWNYAIFWQLLQSKSGDWVLGWGDGCCREPNEEEERAEEDEERKGNTSKRRSSSR* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01713 80 MobiDBLite consensus disorder prediction 54 80 - -
Rops11g01713 80 PANTHER MYC 5 65 IPR045084 GO:0003700|GO:0006355
Rops11g01713 80 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 73 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01713 Rops-Chr11 26909120 26909508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01713 1 60 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 71.667 6.92e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01713 - - gmx:100819439 111.694