Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01702 ATGGAGAGTCAACCAGCTAAACGCAAACGTGTTTACTCACTTGAACCCAACAAAGTAGTAGAAGCAACATTTACTAGAAATTACATGAACTATTTAGTTCCAGCTTTGATGAAGATCAAGGAAAGGAGTTGTATAGAGCATAACAGCTATTGTGATGTTCAGAATGTTGTCAAGTATGAAGTGGACAAGGCAATGGTGTTCTCAGCTCAAGGTTTTGCATGGAGTAATGCTCTAAAAGTAAACCTTCAAAGGGATGGAGTCAATGTAAATAGTAGCACTAGCATGACAAAAAATGTGGCTAGTGAAGAAGGTTCATCAAGGATTTATGACCAAAATGAAATGGTCCCTCTTGATTTCTCTTCAAACCCTAGTTCAAAGATTTTGGTGAGCAAGAAGGCTAAGCACAATGACATGCCACAAATGAAAAAGGAAGAAAATGATGAAGATGAGGCCATCAATGGTCAATTGAAGAGCCTAAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTCATGAACAAATGGTCAAGGAACTAGGGAGCTATATAAGTTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTTGCTGAGACAAGTTGA 600 0.39 MESQPAKRKRVYSLEPNKVVEATFTRNYMNYLVPALMKIKERSCIEHNSYCDVQNVVKYEVDKAMVFSAQGFAWSNALKVNLQRDGVNVNSSTSMTKNVASEEGSSRIYDQNEMVPLDFSSNPSSKILVSKKAKHNDMPQMKKEENDEDEAINGQLKSLRRLIPGGEEMCHEQMVKELGSYISCLQMQVNILQCLAETS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01702 199 CDD bHLH_AtIBH1_like 142 196 IPR044549 GO:0006355
Rops11g01702 199 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 197 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01702 7 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 33.679 1.16e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01702 - - aprc:113852314 263.848