Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01701 ATGGAACGCATTCCAATTGAGGAAGTATTTGAGCAACTGAAATGTACCAGGGAAGGTTTGTCCTCTGCAGAAGGAGCCAACAGGATTCAAATATTTGGTCCAAACAAGCTAGAAGAGAAGAAGGAAAGCAAATTTCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTTTCATGGGTTATGGAAGCTGCAGCTATAATGGCAATTGCTCTTGCAAACGGTGAAGGGAAGCCTCCAGATTGGCAAGATTTCGTTGGTATCATTTGCTTGCTGATAATCAACTCCACTATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCAGGTCTTGCTCCTAAAACAAAGCCTGATGTAACTGTTGGAGTAAATATAGTTGATACATCTCTTAGTAATGAAATTCCAGATGTTCAATCAGTTGTAGCTAAGGACTCTAACTGTCAAAAGCTTTTTGAATATAATTCTTCCTTAATTCCGTGTCAGGACTTGAACTCCCAGTTTTTCGATGGAGATGTTGATGTTGAATTTGCTAATTATACTCCAGATAAAAGATCTTTGGATGATATGATTGGCATTTTTTATGCGGATGGTTCAAGCTCAAAATTGAAGAATGTGAAGATTGAGAAAGACTAG 645 0.3876 MERIPIEEVFEQLKCTREGLSSAEGANRIQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIICLLIINSTISFIEENNAGNAAAALMAGLAPKTKPDVTVGVNIVDTSLSNEIPDVQSVVAKDSNCQKLFEYNSSLIPCQDLNSQFFDGDVDVEFANYTPDKRSLDDMIGIFYADGSSSKLKNVKIEKD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01701 214 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 117 IPR023298 -
Rops11g01701 214 PANTHER CALCIUM-TRANSPORTING ATPASE 6 120 - -
Rops11g01701 214 Pfam Cation transporter/ATPase, N-terminus 4 66 IPR004014 -
Rops11g01701 214 Gene3D - 51 130 - -
Rops11g01701 214 SMART Cation_ATPase_N_a_2 2 72 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01701 Rops-Chr11 26592936 26601721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01701 1 120 Primary Pumps ATPases AT2G07560 85.833 1.27e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01701 K01535 - gmx:100804422 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05273 2 94182721 94185434 Rops11g01701 11 26592936 26601721 PCT