Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01700 ATGGCGGGTGAGAAGGGAATCAAGAACGAGGCTTTTGATCTGGAACGTATTCCAATTGAGGAAGTGTTCGAGCAATTGAAATGTACCAGGGAAGGTTTGTCCTCAGCAGAAGGAGCCAACAGGCTTCAAATATTTGGTCCAAACAAGCTACAAGAGAAGAAGGAAAGCAAATTTCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTTTCATGGGTTATGGAAGCTGCAGCTATAATGACAATTACTCTTGCAAACGGTGATGGGAAGGCTCCAGAATGGGTTGGTATTATTTCTCTGCTGATTATCAACTCCGCTATCAGTTTCACTGTAGAAAACGATGCTGGAAATACTGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAAGCAAAGATACTAGTGTGCAGTGAGCCTCCTCACACCTTTGTTGAAGAGAGAGGACAAATTGTCATGGGAGGCAAGTCAAGACAGCTGCAGCATTCTCCATTAACAATATTTCATTCACCATTATAG 510 0.4353 MAGEKGIKNEAFDLERIPIEEVFEQLKCTREGLSSAEGANRLQIFGPNKLQEKKESKFLKFLGFMWNPLSWVMEAAAIMTITLANGDGKAPEWVGIISLLIINSAISFTVENDAGNTAAALMAGLAPKAKILVCSEPPHTFVEERGQIVMGGKSRQLQHSPLTIFHSPL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01700 169 Gene3D - 64 134 - -
Rops11g01700 169 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 127 IPR023298 -
Rops11g01700 169 SMART Cation_ATPase_N_a_2 13 85 IPR004014 -
Rops11g01700 169 PANTHER CALCIUM-TRANSPORTING ATPASE 16 132 - -
Rops11g01700 169 Pfam Cation transporter/ATPase, N-terminus 17 79 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01700 Rops-Chr11 26548675 26553870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01700 7 169 Primary Pumps ATPases AT3G42640 60.000 3.28e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01700 K01535 - gmx:100804422 202.601