Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01694 ATGTCAAATTCTGCTTACCATTGTTATGTTGTTATTACGTGGGAAGATTCCTTGGACTTCCAAAGCATTTGTCGCCAGAGAATTTGTTCATATGATAGTTCCTGGCCGTCTTGGAAATTAGGTGATGCTGCAATTGGGATTGTCCTCTTTGTGGTTGTGGTTGTGGTGAAGATAAGTATTCTGGTTTGTGTGTGCCAAAAAAGACTTCAGACTGGCGGTGGATCGGTTAGTCCAGACTCACAATTTCTGACACTCACTATGGATAAATTTCTGAATGATATGGAAAGGGAGAAGCCAATCAGGTTTACTGATCAGCAGCTAAGGATTGCAACTGATAACTACTCCAACTTGTTAGGTTCAGGAGGTTTTGGAGCAGTTTATAAAGGAATCTTTAGTAATGGAACCATGGTAGCTGTGAAGGTTCTACGTGGTAGTTCTGACAAGAGAATTGAGGAGCAGTTTATGGCAGAAGTGGGTACTATTGGTAGAATTCATCATTTCAATCTTGTTCGGCTGTATGGATTTTGCTTTGAAAGAAACTTGATAGCATTGGTTTATGAATACATGGGGAATGGCTCTCTTGACAGGCATCTATTTCTGGAAAACAAGACTCTAGGCTATGAAAAGCTTCATGAGATTGCAGTTGGGACAGCCAGAGGCATTGCTTACTTGCATGAAGAGTGCCAACAAAGAATAATCCACTATGACATAAAACCAGGAAATATTCTCTTGGACCCGAACTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCAAAGCTTTGCAACAGGGAAAATACTCATATAACCATGACTGGAGGTAGGGGGACTCCAGGTTATGCTGCACCTGAACTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGTTTTGGCATGCTGTTATTTGAAATTATAGGTAGGAGAAGAAACCTTGACATTAAACTTCAGGAAAGCCAGGAATGGTTTCCAATCTGGTCTTGGAAAAAATTTGATGCCGGACTAATGGGGGAATTAGTAATAGTATGTCGGATAGAGGAGAAAAATAGGGAGATTGCAGAAAGAATGGTTAAGGTAGCTCTGTCTTGTGTTCATTATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTTGTGAAAATGTTGGAAGGTTCAATAGAAATTCCAAAGCCTTTGAACCCATTTCAGCACTTGATGGATGGGAATTTCGCTGCTCATTCAGTCCATGTGTCACAAACTTATACAACAAGTATTTCTTCTGGCTCTTCTATTATGGTAAGTGACTCCAGCATTGTATGTGCCACTCCTATTATGAGGAAGCATGAGATTGAATTAGCCTCTAGCAATGGCTGA 1353 0.4035 MSNSAYHCYVVITWEDSLDFQSICRQRICSYDSSWPSWKLGDAAIGIVLFVVVVVVKISILVCVCQKRLQTGGGSVSPDSQFLTLTMDKFLNDMEREKPIRFTDQQLRIATDNYSNLLGSGGFGAVYKGIFSNGTMVAVKVLRGSSDKRIEEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRHLFLENKTLGYEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDPNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDIKLQESQEWFPIWSWKKFDAGLMGELVIVCRIEEKNREIAERMVKVALSCVHYRPELRPIMSVVVKMLEGSIEIPKPLNPFQHLMDGNFAAHSVHVSQTYTTSISSGSSIMVSDSSIVCATPIMRKHEIELASSNG* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01694 450 FunFam Putative receptor-like protein kinase 189 390 - -
Rops11g01694 450 SMART serkin_6 112 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01694 450 Gene3D Phosphorylase Kinase; domain 1 87 188 - -
Rops11g01694 450 Gene3D Transferase(Phosphotransferase) domain 1 189 390 - -
Rops11g01694 450 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Rops11g01694 450 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01694 450 FunFam serine/threonine-protein kinase PBS1-like 85 188 - -
Rops11g01694 450 SUPERFAMILY Protein kinase-like (PK-like) 102 415 IPR011009 -
Rops11g01694 450 PANTHER OS07G0415500 PROTEIN 37 394 - -
Rops11g01694 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Rops11g01694 450 Pfam Protein kinase domain 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01694 Rops-Chr11 26415606 26417295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01694 101 395 Receptor kinase-like Gene Family AT5G38280 41.584 1.20e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Rops11g01694 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01694 - - gmx:100803355 660.218