Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01691 ATGTCAAACATGGAGGCAGTAGGATCTTCCTTAGCCATCGTAGGTGCTGTGTTGTTGCTGTTGGCGATGATTGTTATGGTTTTTGACTGCTATAGAAGATCTAAGATTGATAGCAGTCAAGACTCACAAAAGCTGACCCTCACCTTGGATAAATTTCTGAATGATATGGAAAAAGAGAAGCCAATCAGGTTTACAGCTGTGAAGGTTCTACATGGGAATTCTGACAAGAGAATTGAGGAGCAGTTTATGGCAGAAGTGGGAACAATTGGTAGAATTCATCATTTCAATCTTGTTCAGCTGTATGGATTTTGCTTTGAGAGAGACATGAGAGCATTGGTTTATGAGTACATGGGGAATGGCTCACTTGAAGAAAGATCAAAGATTGAAGGCAGTGCAGACTCACAAGTTCTGACTCTCACCTTGGATAAATTTCAGAATGACATGGAAAAAGAGAAGCCAATCAGGTTTACCGGTGAGCAGTTAAGGATTGCAACTGATAACTTCTCTAACTTGTTGGGTTCAGGAGGTTTTGGAAAAGTTTATAAAGGAAATTTTAGTAATGGGACCATTGTAGCTGTGAAGGTTCTAAATGGGAATTCTGACAAGAGAATTGAGGAGCAGTTTATGGCAGAAGTGGGAACAATTGGTAGAATTCATCATTTCAATCTTGTTCAGCTGTATGAATTTTGCTTTGAGAGAGACCTGAGAGCATTGGTTTATGAGTACATGGGGAATGGCTCACTTGAAGAGTATCTGTTTCATGAACACAAGACCTTGAGATTTGGAAAGCTTCATGAGATTGCAGTTGGGACTGCCAGAGGCATTGCATAAGTATTTAAGCAACTTGGGGAACCCTCCTTTAAAAGCTAGCTATTAAGGGGAAGAACCAAGCCACTTAAATTCACCACCAAACATCTCATACTATTCGATGTGGGACTTTTGGTATCCCATACTACCTAGGTCCCTATCACATACTTGCATGAAGAGTGCAAACAAAGAATAATCCACTATGACATTAAACCAGGAAATATTCTGTTGGACAGCAACTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCAAAGCTTTGCAACAGGGAAAATACTCATATAACCATGACTGGTGGTAGCGGGACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGAGTGCTATTATTTGAAATCATAGGCAGGAGAAGAAACCTTGACACTAACCTTCCAGAAAGTCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAGATTTGATGCAGGAGAACTGGGAGAGTTAATAATAGGCTGTGGGATAGATGAGAAGTATAAGGAGATAGCAGAAAGAATGGTTAAGGTAGCTTTTTCATGTGTTCAGTACAAGCCAGAATCAAGACCAATAATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTTGAGATCCCAAAACCTTTGAACCCATTTCAGCAAATGATGGATGCTGGTCTTCCAGTCCAAGCATCACAGACCTATACTACCACTGATGATAGTTCTAGCTTTTCTGTGATGGTAATTGGGAAGTAA 1590 0.4044 MSNMEAVGSSLAIVGAVLLLLAMIVMVFDCYRRSKIDSSQDSQKLTLTLDKFLNDMEKEKPIRFTAVKVLHGNSDKRIEEQFMAEVGTIGRIHHFNLVQLYGFCFERDMRALVYEYMGNGSLEERSKIEGSADSQVLTLTLDKFQNDMEKEKPIRFTGEQLRIATDNFSNLLGSGGFGKVYKGNFSNGTIVAVKVLNGNSDKRIEEQFMAEVGTIGRIHHFNLVQLYEFCFERDLRALVYEYMGNGSLEEYLFHEHKTLRFGKLHEIAVGTARGIA*VFKQLGEPSFKS*LLRGRTKPLKFTTKHLILFDVGLLVSHTT*VPITYLHEECKQRIIHYDIKPGNILLDSNFNPKVADFGLAKLCNRENTHITMTGGSGTPGYAAPELWMPFPVTHKCDVYSFGVLLFEIIGRRRNLDTNLPESQEWFPMWVWKRFDAGELGELIIGCGIDEKYKEIAERMVKVAFSCVQYKPESRPIMSDVVKMLEGSVEIPKPLNPFQQMMDAGLPVQASQTYTTTDDSSSFSVMVIGK* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01691 526 Gene3D Transferase(Phosphotransferase) domain 1 243 490 - -
Rops11g01691 526 ProSiteProfiles Protein kinase domain profile. 166 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01691 526 FunFam serine/threonine-protein kinase PBS1-like 138 242 - -
Rops11g01691 526 SMART serkin_6 166 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01691 526 SUPERFAMILY Protein kinase-like (PK-like) 148 481 IPR011009 -
Rops11g01691 526 Pfam Protein tyrosine and serine/threonine kinase 168 481 IPR001245 GO:0004672|GO:0006468
Rops11g01691 526 Pfam Protein tyrosine and serine/threonine kinase 59 124 IPR001245 GO:0004672|GO:0006468
Rops11g01691 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Rops11g01691 526 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Rops11g01691 526 Gene3D Phosphorylase Kinase; domain 1 140 242 - -
Rops11g01691 526 SUPERFAMILY Protein kinase-like (PK-like) 63 130 IPR011009 -
Rops11g01691 526 PANTHER OS07G0415500 PROTEIN 63 131 - -
Rops11g01691 526 Gene3D Phosphorylase Kinase; domain 1 52 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01691 Rops-Chr11 26357698 26360009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01691 155 519 Receptor kinase-like Gene Family AT5G38280 35.638 2.27e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Rops11g01691 Pkinase 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01691 - - gmx:100776445 538.88