Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01689 ATGACACTCACTATTGATAAGTTTCTGAATGATATGGAAAAGGAGAAGCCAATCAGATTCACTGATAAACAATTAAGGATTGCAACAGATAACTACTCTTACTTGTTGGGGTCAGGAGGTTTTGGAAAAGTTTATAAAGGAGGTTTTAGTAATGGAACCATGATAGCTGTCAAGGTTCTACATGGGAGTTCTGACAAGAGAATCAATCAGCAGTTTATGGCAGAAGTGGGTACCATTGGAAAAGTTCATCATCTCAATCTAGTTAGGCTCTATGGATTTTGCTTTGAAAGAAACTTGAAAGCACTGGTTTATGAATACATGGAGAATGGATCTCTTGACCTGCTTCTGTTCCAAGAAAACAGGACCTTAAGATTTGAAAAGCTTCATGAGATTGCAGTTGGGACTGCTAGAGGTATAGCTTACTTGCATGAAGAGTGCCAACAAAGAATAATCCACTATGACATAAAACCAGGTAATATTCTCTTGGATAGGAACTTCTCTCCCAAAGTTGCTGATTTTGGTTTGGCAAAGCTTTGCAATAGAGAAAATACTCATATAACCATGACAGGAGGTAGGGGGACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGCATGCTGTTGTTTGAAATTATAGGCAGGAGAAGAAACCTTAACATTAATCTACCTGAAGGCCAGGAGTGGTTTCCAATTTGGGTTTGGAAAAAATATGATGCTGAACAAGTGGGGGAGATGATAATTGCTTGTGGGATAGAGGAGAAAAATAAAGAGATTGCAGAGAGAATGGTTGAGGTAGCTCTGTCATGTGTTCAGTCTAGTCCAGAATCAAGACCTACAATGGGTGTGGTGGTGAAAATATTGGAAGGATCAGTTGAAATTCCAAAACCTTTGGACCCATTTCACCACATGATAGATGGGAATTTCCCTGCTTTTCATGTCAGGGCATCACAGAGCAATGCTGATACAAGTGTTGGTTCTGGCTCTTCAGTAATGGGAATCGAATCCAGTCATGAACAAGCTCCTCCTTCAATGACCAAGTATCAGATTGAATTAGCCTCTGCCTAA 1104 0.4022 MTLTIDKFLNDMEKEKPIRFTDKQLRIATDNYSYLLGSGGFGKVYKGGFSNGTMIAVKVLHGSSDKRINQQFMAEVGTIGKVHHLNLVRLYGFCFERNLKALVYEYMENGSLDLLLFQENRTLRFEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFSPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLNINLPEGQEWFPIWVWKKYDAEQVGEMIIACGIEEKNKEIAERMVEVALSCVQSSPESRPTMGVVVKILEGSVEIPKPLDPFHHMIDGNFPAFHVRASQSNADTSVGSGSSVMGIESSHEQAPPSMTKYQIELASA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01689 367 Pfam Protein tyrosine and serine/threonine kinase 35 299 IPR001245 GO:0004672|GO:0006468
Rops11g01689 367 PANTHER OS07G0415500 PROTEIN 9 313 - -
Rops11g01689 367 SMART serkin_6 30 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01689 367 SUPERFAMILY Protein kinase-like (PK-like) 15 300 IPR011009 -
Rops11g01689 367 Gene3D Phosphorylase Kinase; domain 1 6 106 - -
Rops11g01689 367 FunFam Putative receptor-like protein kinase 107 308 - -
Rops11g01689 367 FunFam serine/threonine-protein kinase PBS1-like 5 106 - -
Rops11g01689 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Rops11g01689 367 Gene3D Transferase(Phosphotransferase) domain 1 107 308 - -
Rops11g01689 367 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Rops11g01689 367 MobiDBLite consensus disorder prediction 332 357 - -
Rops11g01689 367 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01689 Rops-Chr11 26337970 26345739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01689 20 309 Receptor kinase-like Gene Family AT5G39030 44.371 2.21e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Rops11g01689 PK_Tyr_Ser-Thr 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01689 - - gmx:100305451 585.489