Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01688 ATGTCAACCTCAACTGACCTTAAAATTTTCTTCATCATCGTTGGGTATTTTGCTTTGTTTACTGCGCCAATGAAGAAGACTTCGGAATGGTCGTGGATCAGAGGTTTTGGAAAAGTTTACAAAGGATGTTTTAGGAATGGAACCATGATAGCTGTCAAGGTTCTGCATGGGAGTTCTGACAAGAGAATTAATCAGCAGTTTATGGCAGAAGTGGGTACCATTGGAAAAGTTCATCATCTCAATCTAGTTAGGCTCTATGGATTTTGCTTTGAAATTTTTTTGATAGCACTGGTTTATGAATACTTGGAGAATGGCTCTCTTGACAGGCATCTGTTCAAGGAAAACAAGACCCTAGGATTTGAAAGGCTTCATGAGATTGCAGTTGGCACAGCCAAGGGCATTGCTTACTTGCATGAAGAGTGCCAACAAAGAATAATCCACTATGACATAAAACCAGGTAATATTCTCTTGGACAGAAACTTTAATCCTAAAGTTGCTGATTTTGGTTTGGCAAAGCTTTGCAACAGGGAAAATACTCATATAACCTTGACAGGAGGTAGGGGGACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGCATGCTGTTGTTTGAAATCATAGGAAGGAGAAGAAACCATGACATTAACCTTTCAGAAAGCCAAGAGTGGTTTCCAATGTTGGTTTGGAAAAGATTTGATGCCGAACAAGTGGAGGAGTTAACAGTAGCTTGTGGGATAGAGGAGCAAAATAAGGAGACAGCAGAGAGAATGGTTAAGGTAGCTCTGTCGTGTGTTCAGTATAGGCCAGAATCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCAGTTGAAATTCCGCAACCTTTGAATCCATTTCAGCACATGATCGATGGGATTTTCCCTGCTCTTCCATTCCCAGCATCACTGACCAATGCTGATACAAGTATTGATTCTGACTCTTCAATGATGGTAAGGTAA 1026 0.4084 MSTSTDLKIFFIIVGYFALFTAPMKKTSEWSWIRGFGKVYKGCFRNGTMIAVKVLHGSSDKRINQQFMAEVGTIGKVHHLNLVRLYGFCFEIFLIALVYEYLENGSLDRHLFKENKTLGFERLHEIAVGTAKGIAYLHEECQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRENTHITLTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNHDINLSESQEWFPMLVWKRFDAEQVEELTVACGIEEQNKETAERMVKVALSCVQYRPESRPIMSVVVKMLEGSVEIPQPLNPFQHMIDGIFPALPFPASLTNADTSIDSDSSMMVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01688 341 PANTHER OS07G0415500 PROTEIN 35 307 - -
Rops11g01688 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Rops11g01688 341 ProSiteProfiles Protein kinase domain profile. 25 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01688 341 Pfam Protein tyrosine and serine/threonine kinase 36 295 IPR001245 GO:0004672|GO:0006468
Rops11g01688 341 FunFam Putative receptor-like protein kinase 102 303 - -
Rops11g01688 341 SMART serkin_6 32 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01688 341 Gene3D Phosphorylase Kinase; domain 1 34 102 - -
Rops11g01688 341 Gene3D Transferase(Phosphotransferase) domain 1 103 303 - -
Rops11g01688 341 SUPERFAMILY Protein kinase-like (PK-like) 35 315 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01688 Rops-Chr11 26337812 26345739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01688 22 311 Receptor kinase-like Gene Family AT5G39030 43.894 4.53e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Rops11g01688 PK_Tyr_Ser-Thr 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01688 - - gmx:100305451 511.916