Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01671 ATGAAAGTGGAAATTCCTTCAGCATTTTGTGGTATTGGTAACAAGCCTCCCTCTGGTTTATCTGACATGGGAGCAGAATTTATCCCCAAGCTTCTCCAGTTGATAAATTATGTGCAACCTCTATCTGGGTCTCCTGCAAATTTTCATGTTTATACTGCACTGTTGAAACCTCATGATAGGATCATGGCACTTGATCTTCCTCATGTTGGGCATCTTTCTCATGGTTATCAGGGACTCTCAACTTCCATTATTCATTTCAGTGTTGAGGATATCATCACTGCAGTTATTGGGCTAATAGATTATCATGCTGCATATAAATTGTGGAAGGTTGACAAGCTTCATTTCTTAGCCTGCTTGTGCTTCTTTTTTGGTGTTCTCTTCATTTCAGTGCCTTTAGTGTATTTGAAGCAGAAAGGCCAGGATGTAGATCTTTTGTCTCAGCATCTTCTTGCTTCTGCGGTTCCTGGTGTATATGCAACTAGTGGTTCAATTGTAGGTCCTAATGCATGGGCTCCAATTGTGGGAATGACTCCTCCTCTTATGGGTGTTTATAGAGGACAAAGAAAAAGGACTTCTTATAAGAGTAGACTAGATAGTTCTAATTGTAAACAAATTGAGATGGGTAGTATAAGAGATTCCCAAAATTATGAGAATAAAGCTAAGTGTGTCTTAGCAAGGTTAGATCAAAGCCTGCAGAGGCTACTGAGTAAAGAATACTGGAGTTGTTCAGCCTGCAGAGCAAGAGAGGAAAAGATCCAGGAAGAGGTGATGACTAGCCAAATCTACCTCAGTGAAGGTTCATCTGCAAACAGACCTCCTCTGTTTGAAGGAAAGGATTTTGGATACTGGAAAACCAGAATGGAGCTGTTCTTAAAATCCCAAGATGTATTCATATGGGATATCATTGAGAAGGGTGACTATTTTCCCACAAGAGTAGCTGAAGATGGTGTTGTTGAAATAAAACCACTTACTGAGATGAATCAAGATGAAAAGCATAGGAACAAGAAAGGTAAAACTAGCTAG 1023 0.3978 MKVEIPSAFCGIGNKPPSGLSDMGAEFIPKLLQLINYVQPLSGSPANFHVYTALLKPHDRIMALDLPHVGHLSHGYQGLSTSIIHFSVEDIITAVIGLIDYHAAYKLWKVDKLHFLACLCFFFGVLFISVPLVYLKQKGQDVDLLSQHLLASAVPGVYATSGSIVGPNAWAPIVGMTPPLMGVYRGQRKRTSYKSRLDSSNCKQIEMGSIRDSQNYENKAKCVLARLDQSLQRLLSKEYWSCSACRAREEKIQEEVMTSQIYLSEGSSANRPPLFEGKDFGYWKTRMELFLKSQDVFIWDIIEKGDYFPTRVAEDGVVEIKPLTEMNQDEKHRNKKGKTS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01671 340 SUPERFAMILY PLP-dependent transferases 24 106 IPR015424 -
Rops11g01671 340 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 37 102 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Rops11g01671 340 Gene3D - 24 120 IPR015421 GO:0003824
Rops11g01671 340 Pfam Serine hydroxymethyltransferase 37 104 IPR039429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01671 Rops-Chr11 25922728 25931075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01671 91 132 Inorganic Solute Cotransporters AT3G15990 80.952 3.88e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01671 K00600 - atri:130820661 86.2705