Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01656 ATGCCAATGGCAACTACACGGCCCATTGATGGGTCTGGCAAGAAGGTTAGAAAGCCTTACACCATTACCAAGTCAAGAGAGAGCTGGACTGAGGAAGAACACGACAAGTTTCTTGAAGCTCTTCGACTATTTGACAGGGATTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAAACAGTGAGTCAGATTCGAAGCCATGCTCAAAAACACTTCTTGAAGGTTCAAAAAAATGGGACAGTAGCACATGTGCCTCCTCCTCATCCTAAGCGCAAAGCTGCTCATCCATACCCACAAAAGGCATCCGAAAATGTTTTGGTGCCACTACCAGCATCCATTGCTTATGCCTCTTCGACAAATACCCTTGCACCTGGGTATGCCACATGGGATGAAACTTCCATGCTGATGAATACCGGATCCAGTAAATCCATGACCTGTCAGGATGAACTCAACAATTTTCATGGAAATGAAGCTGATATTGGATCAAAGGGGATAACACAGATTAGCAACAGTAGTCTCAGTGGTGTTGGGAACTCTAATAGAAGGATACCGACTTCTGAGATACCAAAACAAGGGAAACAAGCTCCGATGCTTCATGGTTCGCCGGACTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTTTTTGATCCAGATACAAATGGCCATGTCCAGAAGCTGAAAGAAATGGACCCTATAAATCTTGAAACTGTTTTGTTGTTAATGCGAAACCTTACCGTCAACTTGTCTAGCCCTGACTTTGGTCCATTAAAAAGGCATTGTCAACATATGATGTCAATGCCATGGCAGTCAAAGACTAAGGTTTTGTTGAGCCAGCAGCAAGACATGGGAGTGTGTTGTGTTGCACTTGCTGTAAAGCCTGAGAAGGAAAAAGAAAAGGAAACGGAGAAGAAGAAGTATCCCATCGGAGCCGAGCATTACCTTCTCTACGAGGAGATTGGACACGGCGTCAGTGCTTCAGTCCACCGCGCTCTCTGTCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATCGCGATCTGAATAATGTTTCTCGTGAAGCACAGACGGTGATCCTGGTGGACCACCCTAACGTGCTGAAATCGCACTGCTCCTTCGTGAGCGACCATAATCTGTGGGTGGTGATGCCGTTCATGGCTGGCGGTTCGTGCCTTCGCATATTGAAAGCGGCACACCCTGATGTTTTTGAGGAGGTGGTGATTGCCACCGTACTGAGGGAGGTGTTGAAGGGTTTAGAGTACCTTCATCATCATGGCCACATCCACAGAGATGTCAAGGCTGGCAACGTTCTCATCGATTCACGCGGTGCCGTCAAGCTTGGCGATTTTGGCGTCTCTGCTTGCCTCTTTGATTCTGGCGACAGACAACGCTCCAGGAACACCTTCGTCGAAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATAACTTCAAAGCTGACATCTGGTCATTTGGTATAACCGCATTGGAACTTGCCCATGGTCATGCTCCTTTCTCAAAGTTTCCACCGCTCAAGGTACTGCTTATGACTCTGCAAAATGCACCCCCCGGCCTTGACTACGAAAGGGGCATCGCTCCAATGATTACATTGCAAGAACACTTTTGGAGGGGCTGCCTGCTTTAG 1671 0.4728 MPMATTRPIDGSGKKVRKPYTITKSRESWTEEEHDKFLEALRLFDRDWKKIEDFVGSKTVSQIRSHAQKHFLKVQKNGTVAHVPPPHPKRKAAHPYPQKASENVLVPLPASIAYASSTNTLAPGYATWDETSMLMNTGSSKSMTCQDELNNFHGNEADIGSKGITQISNSSLSGVGNSNRRIPTSEIPKQGKQAPMLHGSPDFAEVYSFIGSVFDPDTNGHVQKLKEMDPINLETVLLLMRNLTVNLSSPDFGPLKRHCQHMMSMPWQSKTKVLLSQQQDMGVCCVALAVKPEKEKEKETEKKKYPIGAEHYLLYEEIGHGVSASVHRALCLPFNEVVAIKILDFERDNRDLNNVSREAQTVILVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLRILKAAHPDVFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNVLIDSRGAVKLGDFGVSACLFDSGDRQRSRNTFVETPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPLKVLLMTLQNAPPGLDYERGIAPMITLQEHFWRGCLL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01656 556 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g01656 556 ProSiteProfiles SANT domain profile. 24 75 IPR017884 -
Rops11g01656 556 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Rops11g01656 556 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Rops11g01656 556 ProSitePatterns Protein kinases ATP-binding region signature. 318 341 IPR017441 GO:0005524
Rops11g01656 556 ProSiteProfiles Protein kinase domain profile. 312 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01656 556 SMART serkin_6 312 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01656 556 Gene3D Phosphorylase Kinase; domain 1 300 389 - -
Rops11g01656 556 SMART sant 25 73 IPR001005 -
Rops11g01656 556 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 301 538 IPR047173 GO:0043539
Rops11g01656 556 Gene3D Transferase(Phosphotransferase) domain 1 393 555 - -
Rops11g01656 556 Pfam Myb-like DNA-binding domain 26 70 IPR001005 -
Rops11g01656 556 CDD SANT 28 71 IPR001005 -
Rops11g01656 556 SUPERFAMILY Protein kinase-like (PK-like) 310 529 IPR011009 -
Rops11g01656 556 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Rops11g01656 556 FunFam Serine/threonine-protein kinase BLUS1 301 389 - -
Rops11g01656 556 Gene3D - 29 76 - -
Rops11g01656 556 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 73 IPR006447 GO:0003677
Rops11g01656 556 FunFam protein REVEILLE 6 isoform X1 28 76 - -
Rops11g01656 556 Pfam Protein kinase domain 315 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01656 Rops-Chr11 25377997 25379831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01656 301 538 MAP Kinase Kinase Kinase Kinase AT1G79640 86.134 6.06e-155 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Rops11g01656 Pkinase 3.7e-46 CL0016
TF MYB-related Rops11g01656 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01656 K08835 - gmx:100780339 472.241