Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01639 ATGGTGAGAGACATGATGGGCACATACTCATCATCAGGAGGGTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACGAGAATCGCAGGAAGAACGAGAAGAACATCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCCCACCGTTCTCACCCTCTCCTCCAGGTGCGTAGGTATGTTTACCACGATGTGGTTCGATTGGATGATCTGGAAAAGCTCATTGATTGTTCCAATATTCAGCCCTATACCATTAACAGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAATCAAGGTCATGCAAAGGTTCAGCCAATGCATGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGTTCTCTCTCATGCAAGGTTGATTACATGGTGTACGAGGGTCAAAGCTTGTCCAGCATTTTACATCGATGTGATGAATCTGACTTTACAATTTCGCAGTTCGAGGGTCTAAGAGTCGATGGCTCAGAGGTAACTGATGAAGATACCCATTTTGCCCCTAGTTCCTCATACTCCAACACCGAGGACACCAGCAATTCAGTAATTTCACGCGAACCCCACAACATGACCTCCAAGAAGAGCAAGGCCAATAGGTTCCTCCCTGGGATCGTCCTCTCTCTTGGCAGCAGAAGAAAGGGTGCCCCTCACAGGGCTCCTCTCTCCTAG 750 0.484 MVRDMMGTYSSSGGCGGGDMNEKPAWLERLMAETFFGGCGVHENRRKNEKNIFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVVRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRSCKGSANACFTCDRILQEPFHFCSLSCKVDYMVYEGQSLSSILHRCDESDFTISQFEGLRVDGSEVTDEDTHFAPSSSYSNTEDTSNSVISREPHNMTSKKSKANRFLPGIVLSLGSRRKGAPHRAPLS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01639 249 MobiDBLite consensus disorder prediction 190 215 - -
Rops11g01639 249 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Rops11g01639 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 21 248 - -
Rops11g01639 249 MobiDBLite consensus disorder prediction 187 221 - -
Rops11g01639 249 Pfam PLATZ transcription factor 78 149 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01639 Rops-Chr11 24977086 24983359 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops11g01639 PLATZ 6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01639 - - ccaj:109804478 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01639 11 24977086 24983359 Rops11g01639 11 24977086 24983359 ECH