Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01628 ATGGAAGATCAAGAGGAGTGTGAAGTTGGTGAAAGGGGGTGCAAGGAGAAACCTGTTCGAGTTTATGCTGATGGGATTTATGATCTCTTTCACTTTGGCCATGCCCGTTCTCTTGAGCAAGCCAAGAAACTGTTTCCAAACACTTATCTTCTAGTTGGATGCTGCAATGATGAGACCACCCACAAGTATAAGGGAAAAACTGTTATGACTGAGAAGGAACGCTATGAATCTCTTCGTCACTGCAAGTGGGTTGATGAAGTTATTCCAGATGCGCCATGGGTAATCACTCGGGAGTTCCTTGACAAGCATCAAATTGACTATGTGGCACATGATTCTCTTCCTTATGCTGATGCAAGTGGAGCTGGGAAGGATGTCTATGAATATGTTAAGTCTATTGGAAAATTTAAGGAAACAAAACGGACTGAAGGAATTTCTACTTCTGATATCATAATGAGAATTATCAAGGATTATAACCAGTATGTGATGCGTAATTTGGACCGTGGCTATACAAGAAAGGATCTAGGTGTCAGCTATGTCAAGGAGAAGAGATTGAGAATGAACATGGGATTTAAAAAATTGCGTGAGAGAGTGAAGAAACAGCAGGAGAAGGTGGGAAAGAAGATACAAACAGTTGGAAAAATTGCTGGAATGAACCGTAATGAATGGGTTGAAAATGCGGATAGATTGGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATCAGAGACAGAATTCAAGAAAGACTGAGGACACAGCAGCTAAAATCTCTTCTTTATGATGAGTGGGATGATGATGAAGATGAATTCTACCATGATGATGAATCTGTAGAATACTACAGTGACTAA 867 0.4048 MEDQEECEVGERGCKEKPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDETTHKYKGKTVMTEKERYESLRHCKWVDEVIPDAPWVITREFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRMNMGFKKLRERVKKQQEKVGKKIQTVGKIAGMNRNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRTQQLKSLLYDEWDDDEDEFYHDDESVEYYSD* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01628 288 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Rops11g01628 288 FunFam Choline-phosphate cytidylyltransferase 2 1 239 - -
Rops11g01628 288 PANTHER CYTIDYLYLTRANSFERASE 14 286 IPR045049 GO:0004105|GO:0006657
Rops11g01628 288 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
Rops11g01628 288 CDD CCT 17 168 IPR041723 -
Rops11g01628 288 Gene3D HUPs 3 239 IPR014729 -
Rops11g01628 288 NCBIfam cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01628 Rops-Chr11 24818333 24824267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01628 45 277 Acyl Lipid Metabolism Gene Families AT2G32260 79.574 1.56e-135 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01628 K00968 - gmx:100786249 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01628 11 24818333 24824267 Rops11g01628 11 24818333 24824267 ECH