Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g01627 | ATGGCTCAAACTCACACACCCACAGGTGCTCCCACTATTAGCCCCACCATAAGCAAACCATGTAATCCTCCTCCACAACCTGGTCTCAGTTTGATGGTTCTTTTGGCAGCCATTGTGTGTGCCTTTCTCTGTGCTCTTGGCCTCAACACTATGTTACAATGTGTGTTCCAATGTGCTAATCGTGTCATTATGGAGCCTTTGCAATGGATTGCTTCTAGGAGGATCAATTCAGGGCTCAAGAAGAAAGAAATGGTAGCTTTGCCAACCTCAACTTACACCAATTCAGGCTCTCCATCATCTTCAGCTTCTAATTGTGCCATTTGCTTAGTGGAATTCTCTGATGGGGACAACATAAGGTTCCTCCCAAAGTGTAATCACCCTTTTCATGTGGCTTGCATTGATAAGTGGCTGCTTTCTCATTCTTCTTGCCCTACTTGCAGGAACCTCCTCAAGTCTAATGATTCAGTAAACTGCTTACGAATTGTCATATCTTAG | 495 | 0.4424 | MAQTHTPTGAPTISPTISKPCNPPPQPGLSLMVLLAAIVCAFLCALGLNTMLQCVFQCANRVIMEPLQWIASRRINSGLKKKEMVALPTSTYTNSGSPSSSASNCAICLVEFSDGDNIRFLPKCNHPFHVACIDKWLLSHSSCPTCRNLLKSNDSVNCLRIVIS* | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g01627 | 164 | SUPERFAMILY | RING/U-box | 104 | 152 | - | - | |
Rops11g01627 | 164 | Pfam | Ring finger domain | 104 | 147 | IPR001841 | - | |
Rops11g01627 | 164 | SMART | ring_2 | 105 | 146 | IPR001841 | - | |
Rops11g01627 | 164 | FunFam | E3 ubiquitin-protein ligase ATL6 | 68 | 153 | - | - | |
Rops11g01627 | 164 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 68 | 152 | IPR013083 | - | |
Rops11g01627 | 164 | CDD | RING-H2_EL5-like | 105 | 147 | - | - | |
Rops11g01627 | 164 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 30 | 152 | IPR044602 | GO:0016567|GO:0016740 | |
Rops11g01627 | 164 | ProSiteProfiles | Zinc finger RING-type profile. | 105 | 147 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g01627 | Rops-Chr11 | 24813128 | 24813622 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g01627 | 9 | 150 | C3H Transcription Factor Family | AT3G10910 | 40.252 | 2.11e-33 | 115 |