Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01614 ATGGCGCCCATGTTGTATTACTCTCTCCTTTCCCTAGCTTTCATCCTCACCATTAAGATTTTCCTCCAAATGCAATCAAGAAGGTTGAAAAACCTTCCACCAGGCCCACCAACTATCCCCATCACAGGCAACCTCCACCACCTTAAGCCACCTCTCCACCGCACCTTAGCAACCCTGTCACAAAAATACGGTGACATCATTTCCCTCTGGTTCGGTTCACGCCTTGTAGTTGTTGTCTCTTCCCCTTCCTTGGTCCAAGAATGCTTCACTAAAAACGACATTGTCCTCGCCAACCGTCCACGTTTCCTCACCGGAAAATACCTCTTCTACAACTCCACAACCCTAGGGTCCGTCTCTTACAGTGACCACTGGCGCAACCTCCGCCGCATCACCACCATCGACGTCCTGTCCAGCCACCGTCTCAACTCCTTCTTGGGAATCCGACGGGACGAAACAAAGAGGCTCATAGAGAAGCTAGGGAATGACACTGCCACGTGGACGATGGTGGAACTGAGAGGGAGGTTAACGGAGATGACGTTTAACGCCATGATGAGGATGATATCAGGGAAGAGGTATTACGGTGAGGATTGTGACGTAACGGACGTTGAGGAAGCGAGGCAGTTCAGAGAGATAATAACGGAGATGCTGTCACTTTTAGGGGCTAATAACAAGGGTGACTTCTTGCCTCTACTAAGGTTGTTTGATTTTGAGGATTTGGAGAAGAGGCTCAAGAGGATTGCAAAGAGAGCTGATGCATTCTTACAAGGACTCATTCAGGAGCATCGTATTGGGAAGCAAAGTGGTCCTCGTGATACCATGATTTACCATCTCTTGAACTTGCAGGAGTCTCAGCCTGAGTACTATTCAGATCACATTATCAAAGGTCTTATTCAGGTTATGCTTTTGGCTGGAACAGACACATCAGCAGTGACAATAGAGTGGGCAATGACTGAATTGTTGAACAACCCAGAAGCATTGAAGAAGGCAAAGGATGAATTAGACACAAACATTGAGGATTGTACTATTGGAGGATTCAATGTTCCACGAGACACTATAGTTTTGACTAATGCATGGACAATTCATAGAGATCCTAAACTGTGGAGTGATGCCACGAGTTTTAAGCCCGAGAGGTTTGAAAATGAAGGGGAAATTAACAAGTTGATTGCATTCGGGTTAGGAAGAAGGGCTTGTCCTGGGCTGGGCTTGGCACAACGTATCGTGGGCTTCACTCTAGGATTATTGATTCAATGCTTTGAATGGGAACGAGAAAGTGAGGAGAAACTTGATATGACAGAGGAGGACAAAGGGACCATGCCAAAGCTGATTCCATTAAAGGCCATGTGTAAATTACGACCTCTCGTCAATGAGGTTATGAAGTAA 1380 0.4638 MAPMLYYSLLSLAFILTIKIFLQMQSRRLKNLPPGPPTIPITGNLHHLKPPLHRTLATLSQKYGDIISLWFGSRLVVVVSSPSLVQECFTKNDIVLANRPRFLTGKYLFYNSTTLGSVSYSDHWRNLRRITTIDVLSSHRLNSFLGIRRDETKRLIEKLGNDTATWTMVELRGRLTEMTFNAMMRMISGKRYYGEDCDVTDVEEARQFREIITEMLSLLGANNKGDFLPLLRLFDFEDLEKRLKRIAKRADAFLQGLIQEHRIGKQSGPRDTMIYHLLNLQESQPEYYSDHIIKGLIQVMLLAGTDTSAVTIEWAMTELLNNPEALKKAKDELDTNIEDCTIGGFNVPRDTIVLTNAWTIHRDPKLWSDATSFKPERFENEGEINKLIAFGLGRRACPGLGLAQRIVGFTLGLLIQCFEWERESEEKLDMTEEDKGTMPKLIPLKAMCKLRPLVNEVMK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01614 459 PANTHER CYTOCHROME P450 82C3-RELATED 13 337 - -
Rops11g01614 459 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 356 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 390 399 IPR017972 GO:0005506|GO:0016705
Rops11g01614 459 Gene3D Cytochrome P450 18 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 CDD CYP81 64 444 - -
Rops11g01614 459 SUPERFAMILY Cytochrome P450 26 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 Gene3D Cytochrome P450 337 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 Pfam Cytochrome P450 33 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01614 459 Pfam Cytochrome P450 337 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01614 Rops-Chr11 24598308 24601083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01614 5 458 Cytochrome P450 AT4G37340 49.699 1.06e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01614 K13260 - ccaj:109806032 647.121