Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01610 ATGGCAGCCTTGTTGTATTACTCTCTCCTTTCCCTAGCTTTCATCCTCACCATTAAGATTTTCCTCCAAATGCAATCAAGAAGGTTGAAAAACCTTCCACCAGGCCCACCAACTATCCCCATCACAGGCAACCTCCACCACCTTAAGCCACCTCTCCACCGCACCTTAACAACCCTGTCACAAAAATACGGTGACATCATTTCCCTCTGGTTCGGTTCACGCCTTGTAGTTGTTGTCTCTTCCCCTTCTTTAGTCCAAGAATGCTTCACCAAAAACGACATCGTCCTCGCCAACCGTCCACGCTTCCTCACCGGAAAATACATCTTCTACAACTACACAACCCTAGGGTCCGCCTCTTACGGTGAACACTGGCGCAACCTCCGCCGCATCACCACCATCGACGTCCTGTCCAGCCACCGTCTCAACTCCTTCTTGGGAATCCGAAGGGACGAAACAAAGAGGCTCATAGAGAAGCTCGGGCATGACACTGCCACGTGGACGATGGTGGAACTTAGAGGGAGGTTAACGGAGATGACGTTTAACGCCATGATGAGGATGATATCTGGGAAGAGGTATTACGGTGAGGACGGTGACGTAACGGAAGTTGAGGAAGCGAGGCAGTTCAGAGAGATAATAACGGAGATGCTGTCACTTTTAGGGGCAAATAACAAGGGTGATTTCTTGCCTCTACTAAGATTGTTTGATTTTGAGGATTTGGAGAAGAGACTCAAGAGGATTGCAAAGAGAGCTGATGCATTCTTACAAGGACTCATTCAGGAGCATCGTATTGGGAAGCAAAGTGGTCCTCGTGACACCATGATTTACCATCTCTTGAACCTGCAGGAGTCTCAGCCTGAGTACTATTCAGATCACATGATCAAAGGTCTTATTCAGGCTATGCTTCTGGCTGGAACAGACACATCAGCAGTGACAATAGAGTGGGCAATGACTGAATTGTTGAACAACCCAGAAGCATTGAAGAAGGCAAAGGATGAATTAGACACAAACATTGGTATAAACCAATTGGTAGATGAACTAGATCTATCAAACCTCCCATACCTTCAAAACATCATATCTGAGACACTTCGATTGCATCCTCCAGCTCCATTACTATTGCCACATTATTCTTCAGAGGACTGTACTATTGGAGGATTTAATGTTCCACGAGACACTATAGTTTTGACTAATGCATGGGCAATTCATAGAGATCCTAAACTTTGGAGTGATGCCACGAGTTTTAAGCCCGAGAGGTTTGAAGAAGAAGGGGAAATAAACAAGTTAATTGCATTTGGGTTAGGAAGAAGGGCTTGTCCTGGACTAGGCTTGGCTCAACGTACTGTGGGTTTCACTTTGGGATTATTGATTCAATGCTTTGAATGGGAACGAGAAAGTGAAGAAAAACTTGACATGACAGAGGACAAAGGGATCACCATGCCAAAGAAGATTCCATTAAAGGCCATGTGTAAAGCACGACCTATCGTCAATGACGTTATGAAGTAA 1500 0.454 MAALLYYSLLSLAFILTIKIFLQMQSRRLKNLPPGPPTIPITGNLHHLKPPLHRTLTTLSQKYGDIISLWFGSRLVVVVSSPSLVQECFTKNDIVLANRPRFLTGKYIFYNYTTLGSASYGEHWRNLRRITTIDVLSSHRLNSFLGIRRDETKRLIEKLGHDTATWTMVELRGRLTEMTFNAMMRMISGKRYYGEDGDVTEVEEARQFREIITEMLSLLGANNKGDFLPLLRLFDFEDLEKRLKRIAKRADAFLQGLIQEHRIGKQSGPRDTMIYHLLNLQESQPEYYSDHMIKGLIQAMLLAGTDTSAVTIEWAMTELLNNPEALKKAKDELDTNIGINQLVDELDLSNLPYLQNIISETLRLHPPAPLLLPHYSSEDCTIGGFNVPRDTIVLTNAWAIHRDPKLWSDATSFKPERFEEEGEINKLIAFGLGRRACPGLGLAQRTVGFTLGLLIQCFEWERESEEKLDMTEDKGITMPKKIPLKAMCKARPIVNDVMK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01610 499 Gene3D Cytochrome P450 18 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 FunFam Cytochrome P450 family protein 23 494 - -
Rops11g01610 499 CDD CYP81 64 484 - -
Rops11g01610 499 PANTHER CYTOCHROME P450 82C3-RELATED 13 491 - -
Rops11g01610 499 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 Pfam Cytochrome P450 33 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Rops11g01610 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01610 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01610 Rops-Chr11 24493975 24496762 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01610 9 494 Cytochrome P450 AT4G37370 55.510 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01610 K13260 - ccaj:109806032 723.391