Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01579 ATGTTCAAAGCGTTTCTCTGCCAGAATGGTTTTGGTATCACAAGAAAATCAACAACCACGAAACTTGACTCTCTTTCATGGCACTTGCGGTTCCCATCCTCTCTCAAATACCTCAGCACAAGCACCTCAGATTCATACCCATTCGCGGTGTCGTACCTCATCAATAATTTTGGGTTCTCAGTAGAATCCGCACTCAAAGCTTCTTCCAAGGAGGTTCGTTTCAAGACCTCAAAAAAGCCTGATTCAGTTCTCGCATTTTTCAGAAACCAAGGTTTCCCTGACTCAGATATACGCAACATCATCAGAAGGGAACCCTGGCTCCTTTCATGCAATCCTGACAAAAGGGTCTTGCCAAAGTTTCAATTTTTACTCTCCAAAGGCGCTTCTGCTTCTGACATTGTTCGCATCCTGGTAAGGAACCCCAGATTCGTGAAATTAAGCTTGGAGAATAGTCTAATCCCGAAATATAAATTGTTAAATAAATTCCTCCAATCTGAAAAAAGGACCCTTGCTGCTATAATTTGTTGTCCTTCTTTGCTTTCTTGGGAAACTATGGCCCCTACTGTCAAATTGTTGGTTGATAATGGTGTGGCCAGTACCAACATTTTGAGAATACTTCGTGCAGGGCCTTATATTATCTGCTCTAGTGACTTGGGGAAGACGGTGCAGGAATTGAAAAACCTGGGATTTGATCCTTCCAAATCATACTTTGGTGATGCATTGCTGGCCAAAAGATCCTTCGGCAAATCCCAGTGGAATGAGAAAATTGATACCTATAAGAGCTGGGGTTGGTCTGAAGAAACAATTTGGAAGCATTTAGGACGCAGCCAAACTGGGCCTGGGATTTTTGGATATAGTTTGGAGAAAAGGGTCATTCCTAGAGCTTTCGTTGTCCAATATCTTCTATCCAAAGGTTTGAGAAGCAAGAGTGCAAGCTTGATTACACCATTTTTTCTATCGGAGGATATGTTCCTGCAAAAGTTTGTGAAATGTTTTGGAAAGGAGGAAACTTCTCAGCTACTGAAGTTATATCGGGAAAAAATGAATGTTGAAGATAAGGGAACACAGGGGAACCGTGAGATGGTGCACCAGTTTGAAACTGGTCCATCCAATGGACCACCAAAGTTTAGATCAGATACAACTGATTTTACTTGCACTTGTGTTTTACTGTTCATCTTCCTGCTATGTACTCATCCGTACTGTTCATCTTCCTCCTCCGCACCCCTCCGTCACTCCTCTGCTGAGCTCCACCTCCCTCTCTCTGCCAACTCCTCTCTCCTCCGCACCGCCCTCTACCTCCTCCGCTCCACTGCCCCTGATACGGTTCCAATGGTCGGCGCCAGTGCCATGGCCACCTCCCTCTCTCTCCCGACTCCTCTCTTTTCCGCACCGCCCTCCGCCTCCTCTGCTCCACCGCCCAGACTCCTCCTCAGGTCAGGTCGTCGAGCTTCTCTCCAACCACCACAAGTTGACATGATGATAACGTGGAGCTCTCCGATACGGTTTTGA 1509 0.4586 MFKAFLCQNGFGITRKSTTTKLDSLSWHLRFPSSLKYLSTSTSDSYPFAVSYLINNFGFSVESALKASSKEVRFKTSKKPDSVLAFFRNQGFPDSDIRNIIRREPWLLSCNPDKRVLPKFQFLLSKGASASDIVRILVRNPRFVKLSLENSLIPKYKLLNKFLQSEKRTLAAIICCPSLLSWETMAPTVKLLVDNGVASTNILRILRAGPYIICSSDLGKTVQELKNLGFDPSKSYFGDALLAKRSFGKSQWNEKIDTYKSWGWSEETIWKHLGRSQTGPGIFGYSLEKRVIPRAFVVQYLLSKGLRSKSASLITPFFLSEDMFLQKFVKCFGKEETSQLLKLYREKMNVEDKGTQGNREMVHQFETGPSNGPPKFRSDTTDFTCTCVLLFIFLLCTHPYCSSSSSAPLRHSSAELHLPLSANSSLLRTALYLLRSTAPDTVPMVGASAMATSLSLPTPLFSAPPSASSAPPPRLLLRSGRRASLQPPQVDMMITWSSPIRF* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01579 502 FunFam Uncharacterized protein 45 184 - -
Rops11g01579 502 SMART mt_12 275 307 IPR003690 GO:0003690|GO:0006355
Rops11g01579 502 SMART mt_12 203 231 IPR003690 GO:0003690|GO:0006355
Rops11g01579 502 SMART mt_12 170 198 IPR003690 GO:0003690|GO:0006355
Rops11g01579 502 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Rops11g01579 502 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Rops11g01579 502 Gene3D Transcription termination factor 3, mitochondrial 180 336 IPR038538 -
Rops11g01579 502 Gene3D Transcription termination factor 3, mitochondrial 58 179 IPR038538 -
Rops11g01579 502 PANTHER CGI-12 PROTEIN-RELATED 280 334 IPR003690 GO:0003690|GO:0006355
Rops11g01579 502 Pfam mTERF 84 274 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01579 Rops-Chr11 24046129 24049474 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g01579 mTERF 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01579 K15032 - mtr:25488156 308.145