Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01574 ATGTATTCTCTGAAATTGAAATTCTGCACAAGCACATCAGAATCAGACTCCTTTACGGTTTCCTACCTCATTAACAACGTTGGGTTTTCCCCGGAATCAGCTCTAAAAGCTTCAAAACGACTTCGTCTCAAGACCCCAGAGAAACCTGACTCGGTTTTCACCTTATTCAGAAACCGTGGCTTTTCAGATTCTAACATACGCGAAATCTTCAAGAAGGAGCCGTGGCTACTTTCATCGAACCCCCACAAGTCAATTTTGCCAAAGTTTGAGTTTTTTCTCTCCAAAGGTGCTTCTGCCTCTGAAATTGCTCGCATGTTGACAGTGAACCCCGGAATCCTACAAAGAAGCTTAGAGAATTGTATAATCCCTCTTTATGAATTGATAAAGAGGTTATTGAAATCTGACAAGAACACCATTGCTTGCATAATTCGCTGCCCGATGCCCTTGTCTTATAACCTGACAATGAATAATATCAAGTTGATGATTGATTATGGAGTTTGTGATTTAAGCATGGCCAGATTGCTTCTCACGAAAGGTATCAGCAAAAGACGGTGGAATGAGAAAGTTGTCGCCTTTAGGAAATGGGGCTGGTCTGATGAGACCATTCTTCGAGCATTTAGGACGCAGCCTAATTTAATGCTGGCATCTAGTGATAAGATTAATTTGAAAAGGATCATTCCAAGAGCCGCAGTTCTGCAATTTCTTCTCAAGAAAGGATTGCGGAAAAAGGATGCAAGCTTAGTTAAGCCATTTACGTTGCCTAATGAGTTGTTTCTGAGCAAGTTTGTTGTCTGTTTTAAGGAGGAGTCTGCTAATCTACTAAAGCTGTATGAGGAAAAAATGAAGCTTGCATACACAAAGGAGAACACTGGCATGCCAGTCACCAAATATGTAACTTCTTAA 903 0.4075 MYSLKLKFCTSTSESDSFTVSYLINNVGFSPESALKASKRLRLKTPEKPDSVFTLFRNRGFSDSNIREIFKKEPWLLSSNPHKSILPKFEFFLSKGASASEIARMLTVNPGILQRSLENCIIPLYELIKRLLKSDKNTIACIIRCPMPLSYNLTMNNIKLMIDYGVCDLSMARLLLTKGISKRRWNEKVVAFRKWGWSDETILRAFRTQPNLMLASSDKINLKRIIPRAAVLQFLLKKGLRKKDASLVKPFTLPNELFLSKFVVCFKEESANLLKLYEEKMKLAYTKENTGMPVTKYVTS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01574 300 Gene3D Transcription termination factor 3, mitochondrial 25 276 IPR038538 -
Rops11g01574 300 FunFam Uncharacterized protein 15 154 - -
Rops11g01574 300 SMART mt_12 67 98 IPR003690 GO:0003690|GO:0006355
Rops11g01574 300 SMART mt_12 203 241 IPR003690 GO:0003690|GO:0006355
Rops11g01574 300 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Rops11g01574 300 SMART mt_12 139 172 IPR003690 GO:0003690|GO:0006355
Rops11g01574 300 PANTHER CGI-12 PROTEIN-RELATED 14 221 IPR003690 GO:0003690|GO:0006355
Rops11g01574 300 Pfam mTERF 55 222 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01574 Rops-Chr11 24003371 24004441 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g01574 mTERF 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01574 K15032 - mtr:25488156 283.108